Temnothorax americanus: 143907056
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Entry
143907056 CDS
T11456
Symbol
Hel25e
Name
(RefSeq) ATP-dependent RNA helicase 25E isoform X1
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
tame Temnothorax americanus
Pathway
tame03013
Nucleocytoplasmic transport
tame03015
mRNA surveillance pathway
tame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143907056 (Hel25e)
09122 Translation
03013 Nucleocytoplasmic transport
143907056 (Hel25e)
03015 mRNA surveillance pathway
143907056 (Hel25e)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tame03019
]
143907056 (Hel25e)
03041 Spliceosome [BR:
tame03041
]
143907056 (Hel25e)
Enzymes [BR:
tame01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143907056 (Hel25e)
Messenger RNA biogenesis [BR:
tame03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
143907056 (Hel25e)
Spliceosome [BR:
tame03041
]
Complex C
Other components
EJC/TREX
143907056 (Hel25e)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
143907056 (Hel25e)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
143907056
NCBI-ProteinID:
XP_077279689
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MIADSIEAIIQATMADNDDLLDYEDEEQTEQVVDGSGDVPAKKEVKGTYVSIHSSGFRDF
LLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELT
ENQVYVLVMCHTRELAFQISKEYERFSKYMPHVKVGVFFGGLPIQKDEEVLKTVCPHIVV
GTPGRILALVRNKKLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHSKQVMMFSAT
LSKEIRPVCKKFMQDPMEVYVDDEAKLTLNGLQQHYVKLKENEKNKKLFELLDVLEFNQV
VIFVKSVQRCMALAQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRG
MDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQERFDVN
ITELPDEIDLASYIEGR
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctgattctatcgaagcgattatccaggctacaatggcggataacgatgatctt
ctggattacgaagatgaggaacagactgagcaggtagtcgacggaagcggagatgttccc
gccaagaaggaggtgaagggcacgtatgtctctattcacagcagtgggtttagagacttc
cttctcaagccggagattcttcgtgccattgtcgactgtggctttgaacacccatccgaa
gtgcaacacgaatgtatccctcaagcggttcttggcatggatatactgtgtcaagcgaaa
tcgggtatggggaaaacagccgtatttgtattagctactcttcaacagctggaattaacg
gagaatcaagtctacgtcttagtaatgtgtcatactcgagaattggctttccaaatcagt
aaagaatacgaaaggtttagcaagtacatgccacatgtaaaggttggcgtatttttcggt
ggtttacctatccagaaagatgaagaagtcttgaaaactgtatgtcctcatatcgttgtc
ggcactcccggtcgtatcctcgcccttgtacggaacaagaaactgaatctgaaacacctg
aaacactttatactggacgaatgcgacaaaatgcttgaattattagatatgcgccgggac
gtacaggaaatattcagaagcacaccgcacagcaagcaagtcatgatgttcagtgccacc
ctgtccaaggagatacgtcctgtctgcaaaaagttcatgcaagatcccatggaggtctat
gtcgatgacgaggcaaagctcactttgaacggtctccagcaacattacgttaaattgaag
gagaacgagaagaacaagaagttgtttgaactacttgacgttcttgagtttaatcaggtt
gtcatatttgtgaagtcggtacaaagatgtatggctttagcgcaacttttgacggaacag
aatttccctgcgatcgggattcatcggggcatgacgcaggaggagcgactgtccagatat
caacagttcaaagatttccagaaacgtatcttagtggcgacaaacttgttcggacgaggt
atggatatagaacgtgtcaacattgtattcaactatgacatgccagaagattccgacaca
tacctgcatagagtggcacgcgctggtcgttttggtacaaagggtcttgctattacattg
gtgagcgatgaaagtgacgccaaaatattaaacgatgttcaagaaaggtttgacgtaaat
attacagaattaccggacgaaatcgatctcgcttcatacattgagggacgatga
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