KEGG   Temnothorax americanus: 143907812
Entry
143907812         CDS       T11456                                 
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
tame  Temnothorax americanus
Pathway
tame04137  Mitophagy - animal
tame04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tame00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    143907812
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    143907812
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tame04121]
    143907812
Enzymes [BR:tame01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     143907812
Ubiquitin system [BR:tame04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    143907812
  Multi subunit type E3
   ERAD complex
    143907812
   LMBR1L-GP78-UBAC2 complex
    143907812
SSDB
Motif
Pfam: TPR_SYVN1_N zf-RING_2 zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_11 zf-rbx1 zf-RING_UBOX CUE zf-ANAPC11 zf-RING_5 zf-RING_16 G2BR Prok-RING_4 zf-RING_Vps41 LPD39 zf_RING_Vps8_fungal
Other DBs
NCBI-GeneID: 143907812
NCBI-ProteinID: XP_077280936
LinkDB
Position
Unknown
AA seq 609 aa
MPMEFLERLPVLNLRAYTAISFTVLSCSVYYATQIIKDPAWRTNHTRVDVEAHSGDDVDP
TDPADPRSLGTHLKELLECMAVEPVCIWTLINMAHCMLILLGRTIQKLVFGELRASESQH
LKDKFWNFIFYKFIFVFGVLNVQYMDEVVLWCSWLMALGFLSLLSQLCKDRFEYLSFSPT
TPGWSHARLLGLLAAILVLSSFMLLFCIAAAFFFISFNTFAFMAAECILLGVRTIQVMLR
YVIHLYDTRGAGTSTQRSWDKRGPLTYYTDLISELIVLAVEFFHHVHMLLWSNILLSMAS
LVICMQLRYLFYEIQRRITKHRNYLAVLNHMEQNYPMASQDELAENSDNCAICWEKMESA
RKLPCTHLFHNSCLQSWLEQDTSCPTCRLGLSMQANHRENTPEMPPEPQTPTRRNGNHFF
LFLDGSRYVSWLPSFSVEVSHNRLRGNISTLAHTNSQMDAMARQVQLLFPHYSRNVILED
LRMTRSVEWTIENILDGVLTIPHHLMEEPQEESVPQMQTAMTNIMPSSSIQNSSDPRFDI
PFADSGEEPSSLGGRFSKSSTERELILQRRKEHMRLTARRKYLEKHRKSEIDSTNSQITN
TENIENTTS
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgccgatggaatttttggagcggttaccggttctgaatcttcgggcgtataccgccata
agtttcaccgtcctgtcctgctccgtgtactatgccacgcaaataatcaaggatcccgct
tggagaacgaatcacacgcgcgtcgatgtggaagcccattctggagacgacgtcgatccg
actgatccggctgatccgagaagtcttggcacgcatcttaaagaactcttggaatgtatg
gcggtggagcctgtctgcatctggactttaatcaacatggctcactgcatgttgattctt
cttggcagaaccattcaaaagcttgtatttggtgagctacgtgcctcggagagtcaacat
ttgaaagacaagttctggaattttattttttataaatttatctttgtttttggagttttg
aatgtacaatacatggacgaagttgtactctggtgctcatggttgatggcgctcggcttc
ctgagtcttctcagtcaactttgcaaagatcgatttgaatacctgtccttttcacccacc
acgccaggatggagtcacgcgcgacttctcggattgttggcggcgattctcgtcctatct
tccttcatgcttttattctgtattgctgcagccttcttcttcatatctttcaatactttt
gcttttatggcagctgagtgtattctactcggagtccgtacgattcaggtaatgttacgc
tatgtgattcatctgtacgatactcgtggcgccggcacttcgacgcaacgctcttgggat
aaacgtggtccgttgacctactatacggatttgatttcggagctgattgtattggcagtc
gagttttttcatcatgttcatatgcttctgtggagtaacatcttgttgagtatggcatcg
ctagtcatatgtatgcaactgaggtatctgttctacgagatacaacgaagaatcacgaaa
cacagaaactatttggctgtattaaatcatatggagcaaaattatccaatggcttcgcaa
gatgaattagccgagaattctgataactgtgcgatatgctgggagaagatggaaagtgct
cgtaaattaccttgtacgcacttgtttcacaactcgtgcttacaatcctggttagaacag
gatacatcgtgtcccacttgtcgattgggtctgagcatgcaagctaatcacagagagaac
actccagagatgccgcccgagccacagactcctacgagaagaaacggtaatcattttttc
ctctttcttgatggatcgagatacgtgtcttggttgcctagtttctccgtcgaggtctcg
cacaatagattacgtggtaacatatctacgttggcacacactaattcccagatggatgct
atggcgcgacaggtacaactactttttccccattattctcgcaatgtaatcctagaagat
cttagaatgactcgatcggttgaatggacaattgagaatatactcgatggagtattaact
ataccacaccacttaatggaagaaccgcaagaagaatccgtcccacaaatgcaaacggcc
atgacgaatattatgcccagttcttctatccaaaattcatcagatcctagattcgatatt
ccttttgccgacagtggcgaagaaccttcgagccttggtggtcgtttctcgaaatcatct
actgagagagaacttatacttcaacgacgaaaagaacatatgcgattaacagcacgcaga
aagtatttggaaaagcatcggaaatccgagattgattcgacaaattcgcaaataacgaat
actgaaaatattgaaaatactacgtcttag

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