Temnothorax americanus: 143907993
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Entry
143907993 CDS
T11456
Symbol
Root
Name
(RefSeq) ciliary rootlet coiled-coil, rootletin isoform X1
KO
K16469
rootletin
Organism
tame Temnothorax americanus
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tame03037
]
143907993 (Root)
Cilium and associated proteins [BR:
tame03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
143907993 (Root)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
CCDC39
Rod_CreS
CALCOCO1
ATG16
PUMA_CC
Phage_TAC_13
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
143907993
NCBI-ProteinID:
XP_077281305
LinkDB
All DBs
Position
Unknown
AA seq
2003 aa
AA seq
DB search
MSSQNVLEYVRRLLSSLRACLGFIIVICVTSEPVSKGTSQLSARGQMERRRPPFLRASTK
VKETERSTGSKMDSARSGGATEEQNSDEDLSPDALVRQNYELRHRLEEETASYKRRLDTY
RQAQQHQAALVSRLQAKVLQYKQRCSELENQMAETIPCDSSKPATGTVSSTTVLEAAHQT
LRDIREEQIHDMDTALKKLGEERRKCEELLQLNASLKDQLEESHQTNEALTNDLQKLSND
WDILREELAIKEDEWKEEEQAFNEYYISEHNRLLNLWRDVVSVKRLFAEMKSTTERDLSK
LRNEIISSSNEMTSACNSTNFTMKLQATAAQSTPSQKMQQQEEEHAVIVLKTEITALKQQ
HAADRHEIRTKDDRIDQLIREIRNLEERCGVSEAAVSQSVRMQEDIEVLESALRDIAHAV
IQDAESRDADAKQASPHIHLSPSGPIQQRSPKRSTRGSAIPAFAESTISAVRAALQKYQL
TIRELQIKSQTNKEQILAMRKQCDTAEENAQMLNTKVAELISQLDTCRSQCAQLDQEKDM
LQKSFDTVKLEKNALDKNKMELNSTMEALRNNYEKLQKTNNKLQKLCDNLEDEKMYLQNE
LGRISEDVDLKELSLRSEEDRCSKMREELLTLREDLSKTYLAKDMLEQQKLETDGLISQI
EKSKGDLELELERVLLEKSDVQEILMKMEAMCSNHEQDKQRLQEEFKKMTDERNKLANQC
IDQQGDLNSLRKELLQAEQTRLDVESEKVTLNEKIKFLEIEKEKVEMELGQVTRERSDLS
NQLSVLARKKETLNEELMRLRQRLEQSNEMNARINRNLKDLVKDNEEKQVLLETNEKEFQ
RLQEQLASMRTEKEILEGVLFDTQTNLEATHIKKTQLEKEQKEILIKQESLKGQVTRLTK
ELENSEKRAQDIKQSLTQQSGDQIAEFQQIISNMKRQSEDNMKKINDEKEQIRITLEKRL
QQSLLQVEGDKNEEINQFQQRIEELQQHIENLCKQHEEALLRAENDKQQALLIAHHDQQA
LIEKIDTIMRELEEEKTTLERVKREAAARAEQERNNTNQLRDELNRLKTKLDETKLRANE
EKMKLDLKIEELWKERESTQREVEELQVQLHMTEDKVDGLQNQLHDTIRKLKDSDNVNET
MRKELVDVRRQLADTTYEKEKYNNSNKELREHVKQIESERREQGRTLEESYQKIATLEDT
KATMDVERTRLQAQVRDMERDALQLQQQLRFTQDELQKCHENNAQAQNEEKELQARLANE
IEERERIQLQLHQVKKQVIDLDNSLEVTRQELGKLRARADEEDERWRAREQELLVRLEDS
RCRERKLEDQKHNLEVCLADATQQLQELKARLGGSEGRVRALDAQLSQLETAKKEVEQKL
SSVGSTLRRIAGIQMDGSVNMPFKLMSPSRRWSPARAQDHGDSSRDIILDVDPETVRKGV
RSLMQQVAQIERERDDYKTELCSLKKQLNESQENQSDTDVKVNNLLTNIRTLQEEKKSIE
AKLTQTQTGYHAQLDALQQKTEECEHLCEKLTTLEIKMSTESDEKSQYEDKLEKMKQELN
RLETEKRNLQKEVRHSDSRATEMELHRMSLDGDLQRLQMMLQEKEAHIQKLQDRFDTQSR
TTASLEERCASLKSTIEQLKLSLEKASATESELKSEMNLLRHNVMEITTSSQSNNEKLKQ
LQKQLSNAENDRRILSERLETSQQALSNLKHTNQSLIDQNARLQNELANNEVQRSALESQ
LRLSTWPPESGAAKDEELLRQLQTVQRERSEMRGKVDALNDKVKLLEADKRNLERQIASC
KSSCMRSKSYERPEKAHVELLGTSYSLDNLEHENRELRSKIRKLETQLAEKEAELIRLKS
TYIHSSHSLLDTSRDRCGELERIRAAQLQAEKLLEAREQSHRQQVSRLENQIQLLREQLN
QEIKRRQLYVLRSSRAGREMQQLRQALGDSLRTVAQDPSLDAVLLEHEARKLDSTLTSTA
SLPPSLALPAPPSYRSSTPSQLK
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcaaaatgttttggaatatgtacgaagattactaagttctctaagagcatgt
ctcggttttataatagttatttgtgtaacaagtgagccagtttcgaaaggaacttctcaa
ttatcggcacggggacagatggagaggcggcggccaccgtttctcagagcttccaccaaa
gtcaaggagacggagcgaagcactgggagtaagatggattctgcacgcagcgggggtgct
acagaggaacaaaatagtgacgaagatctgtcgccagacgctctagtcagacaaaattat
gagctccgtcatcgcttggaggaagagaccgcgagttacaaaagacgtttggacacgtat
cggcaggctcaacagcatcaagctgctcttgtctcgcggttacaagctaaagttctgcag
tataaacagaggtgttcggaactggagaatcagatggcagagacaattccgtgcgactct
agtaaaccagcgacaggcacagtatcctccaccaccgtgctagaggctgcccatcaaaca
cttcgggatatacgcgaggaacaaattcatgacatggatactgctttgaaaaagctcgga
gaggaacggcgaaaatgtgaggaacttttgcaacttaacgcatccctaaaagatcagctc
gaggagtctcatcaaacaaacgaggcactaaccaatgatttgcaaaaactaagtaacgat
tgggacatattgagagaggaattggctattaaggaagacgagtggaaggaagaagaacag
gcattcaatgaatattacatctctgagcataaccgattactgaacctgtggcgcgatgtc
gtctccgttaaaagactgttcgcagaaatgaagtctactacggaaagggacttatccaaa
ctacggaacgaaattatttcatcgtctaacgaaatgacatcggcgtgcaatagtacgaat
ttcactatgaagcttcaagcaactgcagcgcaatccacgccgtcccagaaaatgcaacaa
caggaagaggaacacgccgtgattgttctaaaaacagagatcacggcactcaagcaacaa
cacgctgccgatcggcatgaaattcgtaccaaagacgaccggatagatcagcttattcga
gaaatccgcaatttagaggaaagatgcggcgtttctgaggcggcggtgagccaaagcgtg
cgtatgcaggaggatatcgaggtactggaatccgcgttacgagatatcgcgcatgcggtg
attcaggacgccgagagtcgggacgccgacgctaaacaggcatccccgcatatccacctg
tcgcccagtggaccgatccagcagagatcgccgaagagaagcacgcgaggtagcgctata
ccggcgtttgccgagagtactataagcgcggtgcgagcggctctgcagaaatatcagtta
acgatacgcgagttacagataaaatcacaaacgaacaaggagcagattttagcgatgcgc
aagcagtgcgacaccgcggaggaaaacgctcagatgttaaatacgaaggttgcagaattg
atctctcagttggatacatgtcgttcgcaatgcgcacaactggatcaagagaaggacatg
ctgcagaaaagtttcgacacggtgaaattggagaagaatgcgttggataagaataaaatg
gaacttaatagcacgatggaggctcttagaaataattacgagaaacttcagaagacgaat
aacaaattacaaaagctgtgtgacaatttggaagatgaaaaaatgtatttacaaaatgag
cttggcagaatatcggaggatgttgatttgaaggaattgagtttacgatcggaggaggat
agatgtagtaaaatgagagaggagcttttaacgttacgagaagatttgagtaaaacttat
cttgcgaaagacatgttggaacagcaaaagttagaaactgacgggttaatctctcagatc
gaaaagagcaaaggtgatcttgagttggaactggaacgtgtactactggaaaagtcagac
gtacaggagattttgatgaagatggaagcaatgtgttctaatcatgagcaagataagcaa
cgattgcaggaagaattcaaaaaaatgacagacgagagaaataagcttgcaaatcagtgc
atcgatcaacaaggggatctgaattcattgagaaaggaattgctgcaagccgaacaaact
cggcttgacgtggaatctgagaaagttacgttgaatgaaaagattaaatttttagagatt
gaaaaggagaaggtggaaatggaattgggtcaagtgacacgcgaacgcagcgacttaagc
aatcaattatcggtcttggcgcgaaaaaaggaaacgttgaacgaagagctcatgagactt
aggcaaagattagaacaatccaacgaaatgaatgcacgaataaacagaaacttgaaagat
cttgtgaaagataatgaagagaaacaggtactcttagaaacaaatgaaaaggaatttcaa
agattgcaagagcagcttgcttcaatgcgcaccgagaaagaaatattagaaggagtgttg
tttgatacacagaccaatttggaagctacacatatcaagaagacacagttagagaaagaa
cagaaagagatactaataaaacaggagagcttgaagggacaggtgacgcgactaacgaaa
gaattggagaatagtgaaaaacgtgcgcaagatatcaaacagtcgcttacgcaacagagt
ggcgatcagatcgcagaatttcaacaaattatatctaatatgaagagacaatcggaagat
aacatgaagaagataaacgacgaaaaggaacaaataagaataactttagagaaacggtta
caacagtctttattacaagtggaaggagacaaaaatgaagaaattaatcagtttcaacag
cgaatagaggagttgcagcaacacatagagaatttgtgtaagcagcatgaagaagcgctt
cttagagccgagaatgataaacaacaagcacttttaatagctcatcacgaccaacaggcg
ttaatcgaaaaaattgacactattatgcgcgaattagaagaagaaaagaccactttggaa
cgtgttaaaagagaggccgcagcgcgcgccgagcaagaacgaaataatacgaatcagttg
cgcgacgaattaaatcgtctcaaaacaaagttggacgaaacaaagttgagagctaacgag
gaaaaaatgaaacttgatttaaagatagaggagctttggaaggaacgggagtccacgcaa
cgagaagtcgaagaattgcaagttcaactgcacatgacggaggataaagtagacggcctg
caaaatcaattacacgatactattaggaaactcaaagattctgacaatgttaatgaaacg
atgcgcaaagagttagttgacgtacgaagacaattagcggataccacgtatgagaaagaa
aaatacaacaacagtaacaaagaattgcgggaacacgttaagcaaattgagagcgaaaga
agggaacaaggaagaacgttggaggagtcgtaccagaaaatagcaacattggaagacacg
aaagcgaccatggacgtcgagaggacgcgtctgcaggcgcaagtacgcgacatggaacgc
gacgcgttacaactgcagcagcaacttcgtttcacgcaggacgagttacagaaatgccac
gagaacaatgcccaggctcaaaacgaagaaaaagagctgcaggccagacttgctaacgag
atcgaggagagagagcgaatacaattgcaattgcatcaagtgaagaaacaggtaatcgac
ttagataacagtttggaagttacgcggcaagaacttggaaaactacgcgcgcgagcggat
gaagaagatgaacggtggcgtgcccgagaacaagagttgctggtgcggctcgaggatagc
cgctgtcgcgaaagaaaattggaagatcagaaacataatctggaagtttgcttggccgat
gccacgcagcaacttcaagagctaaaagcacgcctcggaggatccgaaggcagggtaaga
gcactcgatgcccaattgtcgcaattggagactgctaagaaggaagtagaacagaaactg
agcagtgtgggttccacgctacgccgtatcgccggtattcaaatggatggaagcgtaaac
atgccgtttaaattaatgagcccctcgagaagatggagtccagcgcgtgcgcaagaccat
ggtgatagtagcagagatatcatactggacgttgatcctgaaaccgttaggaaaggagta
cgatcgcttatgcaacaagttgctcaaatcgaacgcgagagggatgattacaaaacagaa
ctgtgtagcttgaagaagcaactgaacgagtctcaagaaaaccaaagcgatacggatgta
aaagtcaataatcttctgactaatattcggacgcttcaggaagagaaaaaatctatcgaa
gcaaaactaactcaaacgcaaactggctatcacgcacagctggacgcacttcaacaaaag
accgaggaatgtgagcatttatgtgaaaagcttacaaccttagagataaaaatgagtacc
gagtcagacgaaaaatctcagtacgaggataaactagagaaaatgaagcaagaattaaac
agattggaaacggagaagcgtaatctacagaaagaagtccgtcacagcgactctcgagca
acagaaatggaattgcacagaatgtctctagacggcgatctccaaagattgcaaatgatg
ctgcaagaaaaagaagcgcatattcaaaaactgcaagaccgctttgacacacaaagccgt
accacagcaagtttagaggaacgttgcgcttcgttaaaatctactatagaacaattaaaa
ctatcattagaaaaagcatcggctacggaaagcgagcttaagagtgaaatgaatttgtta
cgacacaacgtaatggagatcactacttcctctcaaagtaacaatgaaaaactcaagcag
ctgcagaaacaactctcgaatgccgaaaatgatcgcagaatattatctgaacgtttggaa
acgtctcagcaggccttgagcaatttaaaacataccaatcaatcgttgatcgatcaaaac
gcacggctgcagaacgagctagctaataatgaggtacagcgatcagctttagaatcgcaa
ttaagattgtctacatggccaccagaaagcggcgcggctaaagacgaagaactattgcgt
caattgcaaactgttcaaagagaaagaagcgaaatgaggggaaaagtagatgctctcaac
gacaaggtgaagctattagaagctgacaaacgtaatttagagcgccagatcgcttcgtgc
aagtctagttgtatgcgaagcaagagttacgagcgtccggaaaaggcacatgtagaactc
ctgggcactagttacagcctcgacaatttggagcatgaaaatagagaattaagatcgaag
atacgcaaattggagactcaattagcggagaaggaggccgagcttatacgcctgaaatca
acttacatccattcctctcattcgttattggacacgagtcgtgatagatgcggagaatta
gaacggatcagagccgcgcaactgcaagccgagaaattattggaggcaagagaacagagc
catcgtcagcaagtatcgcgtttggaaaatcagatacaattattgcgggagcagctcaac
caagagataaagcgcaggcaactttacgttttacggagttcgcgagccggtagagaaatg
caacaattgcgacaagcattgggcgactctttgagaaccgtggcgcaggatccgtcgctg
gacgcggtgttattggaacacgaagcgcgtaaattggactctaccctgacgagcaccgct
agtttaccgccgtcattagctttacccgccccaccgtcttacagatccagcaccccttca
cagctcaaataa
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integrated database retrieval system
