Temnothorax americanus: 143908221
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Entry
143908221 CDS
T11456
Symbol
Sf1
Name
(RefSeq) splicing factor 1
KO
K13095
splicing factor 1
Organism
tame Temnothorax americanus
Pathway
tame03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143908221 (Sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tame03041
]
143908221 (Sf1)
Spliceosome [BR:
tame03041
]
Complex A
Other components
Complex A specific factors
143908221 (Sf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
143908221
NCBI-ProteinID:
XP_077281819
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MNQSRNFTSLLNPSYLQNAQQQQQQQQQQNQNPVSVNSGAAAAAAAAAAAAAAAAAVSAA
IANGTQPSANTANAVTASRKREAEGDGKQEKESKEGERKKRKKTRWSGSEHDKTFIPGMP
TVLPTNLTVDQEKAYLFQLQIEEISRKLRTGDLGIPLNPEERSPSPEPIYSSDGKRLNTR
EYRTRRKLEEERHNLIQKILKINPEFKPPPDYKPPIIRVHDKVMIPQEEHPDINFVGLLI
GPRGNTLKSMEKETGAKIIIRGKGSVKEGKVGRKDGQPLPGEDEPLHAYITANNLDAVKK
AVERIHEIIRQGVEVPEGQNDLRRNQLRELALLNGTLRENDGPRCTNCGASDHKSWLCPD
KPNVTNNIVCSSCGGAGHIARDCRSKRPGQGGPAAAGMGGMGQAGDKAKIDEEYMSLMAE
LGEGPPPDRSKTGQNRQTPNPNYPGLFDRQQPPRALMAAPAHPPPQMMQGGPMMPPPGMA
PPPWSQGGEGMNNMNMQWQPPVSMPPPPGVMQPPPPPPGSTTQPNIPPLMPWMAGNNQPP
PPGQMPPTQIPPPGMGIPPWQQGQQGPMRPPPPGTAPPPGFPGGWQPQQMGGWPPAAPVP
PPPQQQTPAPPGIDLNTLPTLLAQPPPPPPPTS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagtcgcggaatttcacgtcgctgttgaacccgagctacttgcagaacgcgcag
caacaacagcagcagcagcagcagcagaaccagaaccccgtgagcgtgaactcgggagcg
gcagcggcagcggcagcggccgccgccgccgctgccgccgccgccgcggtgagtgccgcg
atcgcgaacggcacgcagccgagcgcaaacacggcgaacgccgtaacggcgagccgcaag
cgggaagcggagggtgatggtaaacaggagaaagaatcgaaagagggagaacgtaagaag
aggaaaaagactagatggagcggtagcgaacatgacaaaacatttataccgggcatgcct
acggtactaccgacaaatctgactgtcgaccaggagaaggcttatctctttcagctgcag
attgaggaaatcagcaggaagctacgcactggagatcttggaattccacttaaccctgag
gaaagatccccgtctccggagcctatttacagtagcgatggtaaacggttgaacacgaga
gaatatcgtacgagacgtaaattagaggaagaacgtcataatctgattcagaagatcctt
aaaatcaatccagagttcaagccaccaccggattataagccaccaataatacgagtccat
gataaagtaatgattcctcaggaagagcatcctgatataaatttcgttggtttgcttatt
ggaccgcgtggaaatactctaaaatctatggaaaaggaaactggggcaaagattataatt
cgtggaaagggctctgtaaaggaaggaaaagttggcaggaaagatgggcagcctttaccg
ggcgaggatgaacccttacatgcatatattaccgcaaacaatttagatgctgtgaagaaa
gccgtggaacgaattcacgaaattattcggcaaggtgtggaagtgccggaaggtcaaaac
gacttgcgtcgtaatcaattacgcgagttggctttattgaacggaacattacgcgagaat
gatgggcctcgttgtacaaattgtggagcttcggatcataaatcttggctgtgccctgat
aaaccaaatgtgaccaacaacatagtatgttcaagttgtggtggtgcgggacatatcgct
cgagattgcagatcaaagagacccggtcaaggaggtcccgcagccgctggaatgggggga
atgggtcaagctggagataaagctaaaatagatgaagagtacatgtcgctcatggcagaa
ttgggagaaggcccaccaccggacagatcgaaaacgggacaaaacagacagactcccaat
cccaattatcccggactgttcgatagacaacagccacctcgcgcgttaatggcagctcca
gcgcatccaccaccgcagatgatgcagggcggtccaatgatgccgcccccgggcatggca
ccgccaccgtggagtcaaggaggcgaagggatgaacaacatgaacatgcaatggcagcca
ccggtaagcatgccgccgccgccaggagtgatgcagccgccaccgccgccacctggttcc
actacgcagcccaacattccgccattaatgccatggatggccggcaacaatcaaccgccg
ccaccaggtcaaatgccgcccacgcagattcctccgcccgggatgggcataccgccgtgg
cagcaaggtcagcagggaccgatgcggccaccaccgccgggcacggcgccgcctccggga
ttccccggtggttggcagccgcaacagatgggtggctggccaccggctgccccggtccca
cctccgcctcaacaacagactcccgcaccacccgggattgacctgaacacgctgccgaca
ttactggcgcaaccaccgccgccacctccgcccaccagttag
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