Temnothorax americanus: 143908790
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Entry
143908790 CDS
T11456
Symbol
Ssl1
Name
(RefSeq) general transcription factor IIH subunit 2 Ssl1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
tame Temnothorax americanus
Pathway
tame03022
Basal transcription factors
tame03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tame00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
143908790 (Ssl1)
09124 Replication and repair
03420 Nucleotide excision repair
143908790 (Ssl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tame03021
]
143908790 (Ssl1)
03400 DNA repair and recombination proteins [BR:
tame03400
]
143908790 (Ssl1)
Transcription machinery [BR:
tame03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
143908790 (Ssl1)
DNA repair and recombination proteins [BR:
tame03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
143908790 (Ssl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
IBR
Motif
Other DBs
NCBI-GeneID:
143908790
NCBI-ProteinID:
XP_077282727
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MAEEDAEEKEYRWETGYEKTWEAIKEDDHGSLEASVADIIHNAKRKRQLERKQGARLGMM
RHLYIILDASESMSSQDLKPTRFLCSLKLLEDFIEEFFYQNPISQLGVIITRNKRAEKVS
DLAGNSKKHVKDVQTLQRTVVGGEPSLQNSLELATKLLKLLPSHASKEILVIIGALTTCD
PGDINETIRNMKLDGIRCSVIGLAAELYICKRMANVTGGEHSVALDDKHYKEHVNAHVDP
PPAATRLDAALVKMGFPHHALHSSAPDTSMTMCMCHAQTSDETVKLMTTGYLCPQCLSKH
CELPVECRACGLTLVSAPHLARSYHYLFPVDLFKERAPEGAHSFCFGCQKTFAQKDKKVY
TCGKCNQTFCLDCEIFIHEILHTCPGCAINPETYRKSADRS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaagacgccgaggaaaaggagtatcgttgggaaactggttacgaaaagact
tgggaagcgatcaaggaggacgaccacggctcgttggaagcttctgtcgcggacattatc
cacaatgctaagagaaaacgtcagttggaaaggaaacagggtgccagattaggaatgatg
agacatctctatattatcttggatgcttccgaatcaatgtcgagtcaagatttaaagcca
actcgttttctgtgttctctaaagcttctagaagatttcatcgaagaattcttctatcaa
aatcctataagtcaattgggtgtaattataactagaaataaaagggctgagaaagttagc
gatttggctggtaactcaaagaagcacgttaaggacgtgcaaacgttgcaacgaactgtg
gtaggcggtgaaccttctttgcaaaactctttagaattggccacaaagttattgaagtta
ttgccgtctcacgctagtaaagaaatattggtaattataggggccttaactacgtgcgac
cctggagacatcaacgaaacgatacgaaacatgaaattggacggtattagatgtagcgtg
ataggattggccgctgaattatacatttgtaaacgaatggcgaacgtcaccggtggcgaa
cacagcgttgcgctcgatgataaacattataaggagcacgtgaacgcacatgtagatcct
ccgcctgcggcaacgcgattagatgcagcgctcgtgaaaatgggatttcctcatcatgct
ttacattctagtgcgccggatacatctatgacgatgtgtatgtgccatgcacaaacgtcc
gacgaaacggttaaacttatgaccactggctacctttgtccccagtgcctcagtaaacat
tgcgaactccctgttgagtgtagagcttgtggtcttactttagtctctgctccacattta
gcgcggtcgtatcattatctatttcctgtggatctttttaaagaacgcgcacctgagggc
gcgcactctttctgctttggttgccagaaaacctttgctcaaaaggacaaaaaggtatat
acttgcggaaagtgtaatcaaacgttttgtttagactgtgagatatttattcacgagata
ttgcacacgtgtcctggttgtgcgataaatcctgaaacatatagaaagtctgcggataga
tcttaa
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integrated database retrieval system
