Trichlorobacter ammonificans: GEAMG1_0007
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Entry
GEAMG1_0007 CDS
T09459
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
tamm
Trichlorobacter ammonificans
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tamm03032
]
GEAMG1_0007 (gyrA)
03400 DNA repair and recombination proteins [BR:
tamm03400
]
GEAMG1_0007 (gyrA)
Enzymes [BR:
tamm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GEAMG1_0007 (gyrA)
DNA replication proteins [BR:
tamm03032
]
Prokaryotic type
DNA Topoisomerases
GEAMG1_0007 (gyrA)
DNA repair and recombination proteins [BR:
tamm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GEAMG1_0007 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CAH2029829
UniProt:
A0ABN8HB39
LinkDB
All DBs
Position
GEAMG1:6796..9345
Genome browser
AA seq
849 aa
AA seq
DB search
MLEHTPQKIAVNIEDEMKRSYMDYAMSVIIGRALPDARDGLKPVHRRCLYAMHDMGNDYN
KPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRYLLVDGQGNFGSVDGDSPAAM
RYTEIRMKQLTHELLADLEKETVPFTANYDESLQEPAVLPAKFPNLLVNGSAGIAVGMAT
NIPPHNLGEVVDAIIALIRNPQLTFEELLALVPGPDFPTGGTIYGRQGIIDAYATGRGII
QVRAKAHVETSKKQDRQSIVVTEIPYQVNKARLITSIAELVKEKRIEGIADLRDESDRDG
MRIVIDLKKDENAEVLLNQLYKHTQMQTSFGINMLAIVHNRPKLLSLEEMMLCFIEHRRE
VVTKRTLFELKKAEARAHILEGLKIALDWLDAVIELIRESKTPPEAKQGLMDGAFADPVY
LKRLDLPAPAGYEGGVRLSELQAQAILEMRLQRLTGLERDKIIQEYEDILRLIARLKEIL
GSDAEIMAIIVGELTEIKEKFGDKRRSEIVDRTAEISLEDTIEDAEMVVTVSHGGYIKRS
AVDLYRAQRRGGKGKTGMKTKEEDFVEQLFIASTKDYLLFFTDMGRVYRIKVYEIPEGSR
TTRGKAVVNLVNVQDGEKVTTILPVKDLSREDLYLFMATKNGVVKKTPLVEYVNIRTTGI
NAVNLDEGDKLIAVALTDGSSDIFLASRGGKAIRFSEADARPMGRVTRGVRGMNLESGDE
VIGMEVVDPSVAGTTIFTVTENGYGKRTDLDEYRGQSRGGKGLITIKTNERNGMVVDVMQ
VSDENELMVITDQGKILRVPVSGFSVIGRNTQGVRLMVTEEQEKIVAVARLAERDDDEGT
DAADGETAE
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaacatacaccccagaagatagcggtcaatatcgaagatgagatgaaacggtcc
tacatggactacgccatgtcggtcatcatcggccgggccctgcccgacgcccgggacggc
ttgaagccggtgcaccggcgctgcctctacgccatgcacgacatgggcaacgactacaac
aagccgtacaagaagtcggcccgggtggtcggtgacgtcatcggtaagtatcacccccac
ggcgacaccgcggtctacgataccatcgtgcggatggcccaggacttctccctgcgctac
ctgctggtggacggccaggggaacttcggctccgtggacggcgactcgccggccgccatg
cgctacaccgaaatccggatgaagcagctcacccacgagctgctggccgacctggaaaaa
gagaccgtccccttcaccgccaactacgatgaatcgctgcaggagccggcggtgctgccg
gccaagttccccaacctgctggtgaacggttccgccggtattgcggtgggcatggccacc
aacatcccccctcacaacctgggggaggtggttgatgccatcatcgcgcttatccgcaat
ccccagctcaccttcgaagagttgctggccctggtgccggggcccgacttccccaccggc
ggcaccatctacgggcgccaggggatcatcgacgcctacgccaccggccgggggatcatc
caggtgcgggccaaggcccacgtggagaccagcaagaagcaggaccgccagtccatcgtg
gtcaccgagatcccctaccaggtcaacaaggcgcgcctgatcaccagcattgccgagctg
gtcaaggagaagaggatcgaggggatcgccgacctgcgggacgagtcggaccgggacggc
atgcggatcgtcatcgacctgaaaaaggacgagaacgccgaggtgctgctcaaccagctc
tacaagcatacccagatgcagacctccttcggcatcaacatgctggccatcgtgcacaac
cggcccaagctgctgtcgctcgaagagatgatgctctgcttcatcgaacaccgccgggag
gtggtcaccaaacggaccctgttcgagctgaagaaggccgaggcccgggcccatattctg
gaaggtctcaagatcgccctggactggctggacgcggtgatcgaactgatccgcgaatcc
aagaccccgcccgaagccaagcaggggctgatggacggcgcctttgccgacccggtctac
ctgaagcgtctcgacctgccggcaccggccggctacgaaggcggggtaaggctgtccgag
ctccaggcccaggcgatcctggagatgcggctgcagcgcctcaccggtctggagcgggac
aagatcatccaggagtacgaggatatcctccggttgatcgcccggctgaaggagattctg
ggttccgacgcggagatcatggcgatcatcgtcggtgaactgaccgagatcaaggagaag
ttcggcgacaaacgccgcagcgagatcgtggaccgtaccgccgagatctccctggaggac
accatcgaggatgccgagatggtggtgaccgtctcccacgggggctacatcaagcgcagc
gccgtcgacctctaccgtgcccagcgccgcggcggcaagggcaagaccggcatgaagacc
aaggaagaggatttcgtggagcagctgttcatcgcctccacgaaggactacctgctcttc
ttcaccgacatgggccgggtctatcggatcaaggtctatgaaattccggaaggcagccgc
accacccggggcaaggcggtggtcaacctggtcaacgtccaggacggcgaaaaagtcacc
accatcctgccggtgaaggatctgagccgcgaggacctctacctgttcatggccaccaaa
aacggcgtggtcaagaagaccccgctggtggagtatgtcaatatccgtaccaccggcatc
aacgccgtcaacctggatgagggtgacaagctgatcgccgtggccctgaccgacggcagc
agtgatatcttcctggcatcccgcggcggcaaggcgatccgcttcagcgaagccgacgcc
cgtcccatggggagggtgacccgcggggtgcgggggatgaacctggagagcggcgacgag
gtgatcggcatggaggtggtggacccctccgtggctggtaccaccattttcacggtcacc
gagaacggctacggcaagcggaccgatctggacgaataccgcggccagagtcgtggcggc
aaggggctgatcaccatcaagaccaacgagcgcaacggcatggtggtggacgtgatgcaa
gtcagcgacgagaacgagctgatggtgatcaccgaccagggcaagatcctgcgagtaccg
gtctccggcttctcggtcatcggccgcaacacccagggggtccgcctgatggtgaccgaa
gagcaggagaagatcgttgccgtggcccgtctggccgagcgggacgacgacgagggcact
gacgcggctgacggtgaaacggcggagtag
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