KEGG   Trichlorobacter ammonificans: GEAMG1_0059
Entry
GEAMG1_0059       CDS       T09459                                 
Name
(GenBank) Type I restriction-modification system, restriction subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tamm  Trichlorobacter ammonificans
Brite
KEGG Orthology (KO) [BR:tamm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tamm02048]
    GEAMG1_0059
Enzymes [BR:tamm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     GEAMG1_0059
Prokaryotic defense system [BR:tamm02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   GEAMG1_0059
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like HSDR_N_2 Tup_N
Other DBs
NCBI-ProteinID: CAH2029881
LinkDB
Position
GEAMG1:93940..97137
AA seq 1065 aa
MTVFRFNEKYLSQIPALQLLINLGYEYLPPEQVMKQRQGKTGNVLLEGILCDQLKRLNRI
NYKSREFLFSEENIQTAVQKLKNVKYDGLLKTNEAIYDLITLGTALEQTVEGDSKSFNLN
YIDWRNWERNAFHVTAEFNVARSRSNEAARPDIVLFVNGIPLAVIECKSPNVGVEQAISQ
SIRNQNDDFIPKLFVYTQLVMGINKNAAQYATTGTQAKFWAPWKELRDKESDVAGCVNAA
LAIDKKDLLFSGEFAVARSFFDAHETEGERLVTEQDKVLYSLCRPERLLELAFKFTVFDG
GIKKIARYQQFFVIKSTLERIKQLDSEGRRRGGIIWHTQGSGKSLTMVMLGRNLALDPCV
TNPRIVLVTDRDDLDKQLGNTFAACGLDPSRATSGKHLMELVAEHKASIVTTLIHKFDKA
LNIKKYQDDSPDIFMLIDESHRTNFGNFSARMRQMFPNACYIGFTGTPLLKKEKNNFQKF
GGLIEPHYSINQAVEDGAVVPLLYEGRHVEMEQNKTAIDLWFERHTQGLSKEQKADLKRK
YAKASMLNKADQVVYMRAFDISEHFRANWQGTGFKAQLVAPSKAVALKYQEHLEEIGFVS
SEVVISAPDSREGYDETDDEPTDEVVKFWLKMMKRYGSEDEYTKQIINQFKFGSEPEILI
VVSKLLTGFDAPRNRIIYICKELKEHTLLQAIARVNRLSEDKDEGFVVDYVGLLGELDKA
LTMYSAFEGYDEDDLKGSMTSINSEIEKLPQRYSDLWDIFKEVKNSYDEEAYEVLLADDA
VREDFYQCLAEYSKTLGIALSSEAFITTVDEARLYRYKADLKRFHNLKASVKLRYAEAID
YRDYEPKIRKLLDTHIQANEVIQLNEPVNIFDEKMFNVVKEEQGVYGKSTAAKADAIAHA
TKRVITEKMAEDPAFYQKFSKLIQQAIEDFRAKRISDLDYLNKVSDIRTHVVTRHHDDIP
ESLTGNEEAMAFYGVLKPFFEQHDLERCAGEAIAAETALAIQAILDRHWKVQFWDDDDAQ
KQVINDIDDYLFDEVISNKRVEISLEQMDKLIEQTMQVTRHRRTP
NT seq 3198 nt   +upstreamnt  +downstreamnt
atgaccgttttccgcttcaacgaaaaatacctttcccagatcccagccctgcaactcctg
atcaacctgggctatgaatatctccccccagagcaggtcatgaaacagcgccagggcaaa
accggcaatgtgcttcttgagggtatcctgtgcgaccagctgaaacgactcaaccgcatc
aactacaaaagccgcgaattcctgttcagcgaagagaacatccagaccgccgtccagaaa
ctgaagaacgtcaaatacgacggactgctcaaaaccaacgaagcaatatacgacctgatt
accctcggcaccgcgctggaacagactgtcgaaggggactccaagagcttcaacctgaac
tacatcgactggcgcaactgggagcgcaatgcctttcatgtcaccgctgaattcaacgtg
gcacgctcccgcagtaacgaagccgcccggccggatatcgtcctgtttgtcaacggtatc
ccgctggcggtgatcgaatgcaaatcgcccaacgtgggtgtagaacaggccatctcccaa
tccattcgcaaccagaatgacgacttcatccccaaactgttcgtctatacgcaactggtc
atggggatcaacaaaaatgccgcacagtacgcaacgaccggcacccaggcgaaattctgg
gcgccctggaaagagctgcgtgacaaagaaagtgatgttgccggttgcgtcaatgccgct
cttgcaatcgacaagaaagatctgctgttcagcggcgaatttgccgttgcccggtcattt
ttcgatgcccatgaaacagaaggcgaacgcctggttaccgagcaggacaaggttctctac
agcctctgtcgccccgaacggctgctggaactggccttcaaattcactgttttcgacggc
ggcatcaagaagatcgcccgctatcagcagttctttgtcatcaagtcaaccctggagcgg
atcaaacaactggacagtgaaggccgtcgtcggggcggcatcatctggcacacacagggg
tcgggtaaatcactgaccatggttatgctggggagaaatctggccctcgatccgtgcgta
accaatccacgcatcgtgctggtgacggaccgtgacgacctggacaaacagttgggcaat
acctttgccgcctgcgggctggaccctagccgggccacctcgggcaagcacctgatggaa
ctggtggcggagcacaaggccagcatcgtcaccacactgattcacaagttcgacaaggcg
ctgaacatcaagaaataccaggatgactcccccgatatcttcatgttgattgatgaaagc
caccgcaccaacttcggcaatttctcggcacggatgcggcagatgttccccaatgcctgc
tacatcggttttaccggcacgccgctcttgaaaaaggagaagaacaacttccagaagttc
ggtggcctgattgaaccgcactactccatcaaccaggcggtggaggacggggcagttgtc
ccgctgctctatgagggacgacatgtagagatggagcagaacaagaccgccatcgatctc
tggttcgagcgtcatacgcaggggctgagcaaagagcaaaaggctgacctgaaacggaaa
tatgccaaggcttcgatgctgaacaaggccgatcaggtggtctacatgcgggccttcgac
atcagtgagcatttccgcgccaactggcagggaaccggtttcaaggctcaactggttgcc
ccgagcaaagccgtggccctgaagtatcaggaacaccttgaagagatcggctttgtctct
tccgaagtggttatctcggcaccggacagccgcgaaggatatgatgagaccgacgacgag
ccaacggacgaggtggtcaagttctggctgaagatgatgaaacgctacggcagcgaagat
gaatataccaagcagatcatcaaccagttcaagtttggatcagaaccggaaattctgatc
gtggtgagcaagctgctgaccggtttcgatgctccgcgcaaccggatcatctacatctgc
aaggaactgaaggaacataccctgttgcaggccatagcccgcgtcaaccggctgtcggaa
gacaaggacgaagggtttgtcgttgactacgtggggctactgggtgaactggataaggcc
ctgaccatgtacagcgcttttgaagggtatgacgaggatgacctgaaagggtcgatgacc
tccataaacagcgagatcgagaagctgccccaacgttactccgacctgtgggacatcttc
aaggaggtcaagaacagctatgacgaagaggcctatgaggttctgctggccgatgatgcc
gtacgggaagacttttaccaatgcctggctgaatacagtaaaacgctgggcatcgctctt
tcgtcggaagcgtttattacaacagtcgatgaggcccggctctatcgctacaaggccgat
ttgaagcgctttcacaacctgaaagcctccgtcaaactccgctatgccgaggccattgac
taccgggattacgaaccgaagatcaggaagctgctcgacacccatattcaagcaaatgag
gttattcaactgaatgaaccggtaaatatctttgacgaaaagatgttcaatgtggtgaag
gaagaacagggcgtttacggcaagagtacggcggccaaggctgatgccattgcccatgcc
acgaaacgggtcattacggaaaagatggctgaagatccggcattttaccagaaattttcc
aaactgattcagcaggccattgaggatttccgggccaagcgtatatcggatcttgactat
ctgaacaaagtttccgacatccgcacccatgttgttacccgtcaccatgacgatataccg
gaatccctcaccggcaacgaggaagcgatggcattttatggcgtcctgaagccgttcttc
gagcagcatgatctggaacggtgtgcaggcgaggccattgccgccgaaaccgccctggcc
attcaggccattctggaccgtcattggaaggtgcagttctgggatgacgatgatgcccag
aaacaggtcatcaacgacatcgacgactatctgtttgacgaggtaataagcaataaaaga
gtagaaatcagccttgaacagatggacaaactcattgaacagaccatgcaggtgaccagg
caccggagaaccccatga

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