Trichlorobacter ammonificans: GEAMG1_0676
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Entry
GEAMG1_0676 CDS
T09459
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
tamm
Trichlorobacter ammonificans
Pathway
tamm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GEAMG1_0676 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tamm02000
]
GEAMG1_0676 (msbA)
Enzymes [BR:
tamm01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
GEAMG1_0676 (msbA)
Transporters [BR:
tamm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
GEAMG1_0676 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA
AAA_16
Zeta_toxin
AAA_21
TsaE
AAA_15
AAA_30
RuvB_N
AAA_24
ABC_ATPase
RsgA_GTPase
AAA_14
AAA_5
IstB_IS21
AAA_25
NTPase_1
AAA_29
AAA_28
nSTAND3
AAA_33
ATPase_2
AAA_18
AAA_PrkA
NB-ARC
Rad17
DO-GTPase2
PRK
ATP-synt_ab
SRP54
NACHT
AAA_23
Phage_holin_2_4
Motif
Other DBs
NCBI-ProteinID:
CAH2030488
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All DBs
Position
GEAMG1:complement(730099..731817)
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AA seq
572 aa
AA seq
DB search
MNNFIRLTKYLKPYWWRITIAALASTAYGAMDGAFAYFIAPVLNKIFVAKDLLIFSLMPF
LVIILFAIRGLCRFANEFFMRSAAQLAVNDIRKEVFSNCLRLDLRFFQRHQTGSLISRVF
NDVYVMQDGAGNIITSVFRDGISVISLLVVIFYRDWQLAIISFLAIPLTIYPAQLIGKKI
KRVSKIGQERSGDITSILQEAFSGIKVIKAFGLEKRQIDKFAKSNEDFYHYFRKGIKYSS
LSAPVIEIITSFGIAGVIFFGGKSVMSGRMTAADFFSFVTAMALVYSPFKKLLSTYNDSQ
RCLGAAERVFEIIDAQPEIVDPPHATALPHTQGIVEFKNVSFKYADNTILEDINLVAQKG
QIIALIGPSGAGKTTLVSLIARFFDVSDGVVTLDSHDVRSIRHSDLVSQLSLVDQETILF
NDTIANNIRYGRPDASLDKVEQAARAAYAHDFISAMPEGYETNIGDRGVRLSGGQRQRIC
IARALLKDAPVLILDEATSALDTESEKMVQEALENLMKNRTTFVIAHRLSTVLHADTILV
MDQGRIVERGTHKQLVAQNGLYTRLYEMQFKD
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttcatcagacttacaaaatacttgaaaccgtactggtggcgcataaccatt
gccgcactggcatcaactgcctatggagcaatggacggcgcctttgcatatttcatagcc
cctgtactgaataaaattttcgtggcaaaagacctcctgattttctcacttatgccattt
ttggtgatcattttatttgcaatcaggggactatgtcgctttgcaaacgaatttttcatg
cgctctgccgcacaactggctgtcaatgatatacgcaaggaggtctttagtaactgcctg
cgccttgacttgaggttctttcagcgacaccagacaggctccctgatatcacgagtattc
aacgacgtttacgtgatgcaggatggcgccggcaatattattaccagcgtttttcgggat
ggcatctccgttatttccttgctggtggtgatcttttatcgggactggcagttggcgatc
atctcgtttctggctattccactgaccatatacccggcacaacttatcggaaaaaaaatc
aagcgtgtttcgaagataggccaggaacgttcgggcgacataaccagcattcttcaggag
gccttcagcggcataaaagtaatcaaggcatttggtctcgaaaagcgccagatcgataaa
ttcgccaaatcaaatgaagatttttaccactatttcagaaaagggatcaaatacagtagc
ctatcagcaccggttatcgagatcatcacatcctttggcatagccggtgtaattttcttt
ggcggcaaatcggttatgtcgggcaggatgacggcggccgactttttctcatttgttacc
gccatggcactagtctactccccttttaaaaaacttctcagcacctacaatgacagtcag
cgctgtctgggtgcggctgaacgggtatttgaaatcattgatgcccagccggagattgta
gaccctccccatgcgacggccctgccccatacgcaggggattgtggagttcaaaaacgtc
agcttcaagtatgcggacaatacgatcctggaagatatcaaccttgtggcgcaaaagggc
caaatcatcgcgctgatcggcccctccggcgcgggcaaaaccaccctcgtatcgcttatt
gccaggttttttgatgtttctgacggcgtcgtgacgctggattctcacgatgttcgctcc
atccgccactcagacttggtcagccagctttctttggtagaccaggaaaccattctcttc
aatgacacgattgccaataatatccgctatggtcgccccgatgcctcactcgacaaggtc
gagcaggctgcccgggctgcctacgcccacgactttatcagtgccatgcccgaaggatat
gaaacgaacattggcgaccgtggggttcggctttcaggcggacagcgtcagagaatctgc
attgcccgcgcactgctcaaggatgccccggtgttgattcttgacgaagcaaccagcgcg
ctcgacaccgaaagcgagaaaatggtccaggaagccctggaaaatctgatgaagaaccgg
acaacgtttgtcatcgcccatcgcctctcgacggtgttgcatgccgacacgatattggtc
atggaccagggacgcattgtggagcggggcacccataaacagcttgtggcccaaaacggt
ctttacacacggctttacgagatgcagttcaaggattga
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