Trichlorobacter ammonificans: GEAMG1_0691
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Entry
GEAMG1_0691 CDS
T09459
Symbol
recB
Name
(GenBank) RecBCD enzyme subunit RecB
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
tamm
Trichlorobacter ammonificans
Pathway
tamm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GEAMG1_0691 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tamm03400
]
GEAMG1_0691 (recB)
Enzymes [BR:
tamm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GEAMG1_0691 (recB)
DNA repair and recombination proteins [BR:
tamm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GEAMG1_0691 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
CAH2030503
LinkDB
All DBs
Position
GEAMG1:complement(747652..751191)
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AA seq
1179 aa
AA seq
DB search
MTELDHLTVELAGTTLIEAGAGTGKTYAIVCLYLRLLLERRLPPEQILVVTYTEAATQEL
RGRIRRRLREALTVLAGEPTDDPFLHGLCGTHPEPAVARGLLESALASFDSAAIFTIHGF
CRRALQDHAFESGSRYEVELITDQSRLLREIVEDFWRTHFFAPQEGLTAFALRNGLTPGS
LGTFVTELLRTPAGRVEPLYDAAEILQMEENCRGLFRQVREAWADMRDELVTLLENHRGL
SRSEKFYRADRLPVLVAGMDTFTAGDAPCELFTGFDRFCSSTIAAQRLKKHEPPAHPFFE
RCEQLHRAVGERLLALQGELYTFCRDELRRRKEERNVRYFDDLLSHLREALRGPEGEALA
AVLRTSYPAALIDEFQDTDPFQYDIFSQIYSTATLPLFLIGDPKQAIYSFRGADIFAYLR
AAGETAPSRRFTLTVNRRSTPGLLRGLNTLFGSRPAPFVHTAIVHHPARPADDWPCDELQ
APGDPAPLQVWHLADEERPLSIDAATGRAVTATAGEIARLLGEARRGLAKIGDRPLSPGD
IAVIVRSHRQGQLIQQALQSLAIPSVMRSDATVFASHEAVELCILLRALTSPADETLLRT
ALATDLLGRSATDIAALLVDEPAWEELLLRFREYHQLWLDKGFMVMGRWLLEREQVRGRL
LAHPDGERRLTNLLHCLELLHDTAYRQGLGPEAVTVWFAERVAAGDCGEEYLLRLETDES
LVRIVTIHVSKGLEYPVVFCPFAWNGGSDVGPVLTLHDRFEMVKDFGSPAYARRLPEARR
ELLSENLRLLYVALTRARCRCYLVAADAGTGDRRHLSPLDWLLTTADGEHTATLAHRLRE
LAATSGGAISVSPLPEAPLPAPLRNDHQMRQQPVPRVMAAPLRNDWRVASFTALAAGDGR
RYELPDRDETGDRPESSADAPGKRSILTFPRGARAGIFLHELLEQLDFAAPSPDGIRQQV
ARGLEKHGFESEWLPAVAAMLQNLLTLPLSAPEGSFTLGERPPGSWLSELEFFFPLQLIN
SGQLAACLRAHGGQHQQVDGPALASLLRFKPVRGMLRGFVDLVLRQGERYYLLDWKSNHL
GYRIEDYAPPALQREMERNLYPLQYLLYTVALHRYLGLRLPGYDYDRHFGGVIYLFLRGL
SPRHGESYGVFRDRPSRHLIEELTRLLIALEKETNDVAA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactggatcatctgacggttgagctggccggcaccaccctgatcgaagccggc
gccggtaccggcaagacctatgccatcgtctgcctctacctgcgcctgctgctcgaacgt
cgtctgccgccggaacagattctggtggtcacctacaccgaggcagcaacccaggagttg
cggggacggatccgccgccgcctccgcgaggccctgaccgttctggcaggagagccgacc
gacgacccgttcctgcacggtctctgcggtacccatcccgagccggccgtggcacggggc
ctgctggaaagcgccctggcaagcttcgacagcgccgcgattttcactatccacggcttc
tgccggcgggcactgcaggaccacgccttcgaaagcggttcccgctacgaggtggaactg
atcaccgaccagagccgcctgctgcgggagatcgtggaggatttctggcgaacgcacttc
ttcgctccccaggaagggctgaccgccttcgccctgcgcaacggtctcacccccggctcc
ctcggcacctttgtgacggaactgctgcgcactcctgccggtcgggtggaaccgctctac
gacgcggcggaaatcctgcagatggaggagaactgccgcggcctcttccggcaggtgcgg
gaggcgtgggccgacatgcgggacgagctggtcacgctgctggaaaaccaccgggggctg
agtcgctcggaaaaattctaccgcgccgaccgcctgccggtgctggtggccggcatggac
accttcacggcgggggacgctccgtgcgagcttttcacaggatttgaccggttctgcagc
agcaccatcgcagcacagcgactgaaaaagcatgagccccccgcccacccgtttttcgaa
cgctgcgagcaactgcatcgggcagtcggtgagcggctgctcgcgctgcaaggagagctc
tataccttctgccgcgacgaactgcgccggcgcaaggaggagcggaacgtccgctacttc
gacgacctgctcagtcatctgcgggaggccctgcggggaccggaaggggaggccctggcg
gcggtgctgcgcaccagctatccggctgccctgatcgatgaattccaggacaccgacccc
ttccagtacgacatattcagtcagatctacagcaccgccaccctgccgctctttctgatc
ggtgacccgaagcaggcgatctacagcttccggggggccgacatcttcgcctacctgcgc
gccgccggtgaaacggcgccatcccgccgtttcacgctcaccgtcaaccgtcgctccacc
cccggactgctccggggtctcaacaccctcttcggcagccgtcccgccccctttgtccat
accgccatcgtccaccatccggcccgcccggccgacgactggccctgcgacgagctgcag
gcccccggcgacccggcccccctgcaggtctggcacctggcggacgaggaacgccctctc
tccatcgatgccgccaccggccgggccgtcaccgccacggccggcgagatcgcccggcta
ctcggggaggcccggcgcgggctggcgaagatcggcgaccgccccctttcccccggcgac
atcgccgtcatcgtccgcagccaccgccaggggcagctcatccagcaggccctgcagtcc
ctggccattcccagcgtgatgcgcagcgacgccacggtgttcgccagccacgaagccgtc
gagctctgtatcctgctgcgggcccttacctcccccgccgacgagacgctgctgcgcacc
gccctggccaccgatctgctgggcaggtcggccaccgacatcgccgcactgctggtggac
gagccggcctgggaggagctgctgctccgcttccgtgagtatcaccagctctggctggac
aaggggttcatggtcatgggccggtggcttctggagcgggagcaggtgcggggacgcctg
ttggcccatccggacggtgagcgccgcctgaccaacctgctgcattgtctcgaactgctc
catgataccgcctaccggcagggcctgggaccggaggcggttacagtctggttcgccgaa
cgggtggccgccggcgactgcggcgaggaatacctgctgcgcctggaaaccgacgagagt
ctggtcagaatcgtcaccatccacgtcagcaagggactggagtacccggtggtcttctgc
ccgtttgcctggaacggcggcagcgacgtcggtccggtgctcaccctgcatgaccgtttc
gagatggtgaaggatttcggttcccccgcctacgcccggcgcctgccggaggcccggcgg
gagctgttgtccgagaacctgcgactcttgtacgttgctctgacccgcgcccgctgccgc
tgctacctggttgcagccgatgccggcaccggcgaccggcggcatctctcgcccctggac
tggctgctgacaacggcagacggagagcacacagccacgcttgcgcaccgactgcgggaa
ctggccgccacctctggtggggccatcagtgtctctccgctgccggaagctccgctcccc
gcccccctgcgcaacgaccaccagatgcggcagcagccggtcccccgggtgatggccgcg
cctctgcgcaacgactggcgggtcgccagcttcaccgccttggccgccggcgacggccgt
cggtacgagttgccggaccgggacgaaaccggcgaccggccggagtcgtcggcagacgcc
cccggcaagcgcagcattcttacatttccccgtggcgcccgtgccggcatcttcctgcat
gagctgctggaacagctcgactttgccgcgccgtctcccgacggcatccggcagcaggtg
gcccgcggcctggaaaagcacggattcgagtcggaatggctgcctgcggtggccgccatg
ctgcagaatctgctcacgcttcccctctccgctccggaggggagcttcaccctgggggaa
cggccgccgggaagctggctgtcggagcttgagttcttcttcccgctgcagctcatcaat
tccggacagctggccgcctgcctgcgcgcccatggcggacagcaccagcaggtggacggc
ccggctctggcctcactcctgcgcttcaagccggtgcgcggcatgctcaggggattcgtg
gacctggtgctgcgccagggggagcgctactacctgctggactggaaatccaaccacctg
ggctaccggattgaagactatgcccccccggctctgcagcgggagatggagcgcaacctc
tatccgctgcaatacctgctgtacaccgtggccctgcaccgctacctgggcctgcggctg
ccggggtatgactacgaccggcacttcggcggcgtgatctacctgttcctgcggggactc
tctccccggcacggcgaatcctacggcgtcttccgggaccggccctcccgacacctgatc
gaggagctgacccggttgttgattgctctggaaaaggaaaccaatgatgtcgctgcctga
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