Trichlorobacter ammonificans: GEAMG1_0744
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Entry
GEAMG1_0744 CDS
T09459
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tamm
Trichlorobacter ammonificans
Pathway
tamm03030
DNA replication
tamm03430
Mismatch repair
tamm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GEAMG1_0744
03430 Mismatch repair
GEAMG1_0744
03440 Homologous recombination
GEAMG1_0744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tamm03032
]
GEAMG1_0744
03400 DNA repair and recombination proteins [BR:
tamm03400
]
GEAMG1_0744
Enzymes [BR:
tamm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GEAMG1_0744
DNA replication proteins [BR:
tamm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GEAMG1_0744
DNA repair and recombination proteins [BR:
tamm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GEAMG1_0744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CAH2030557
LinkDB
All DBs
Position
GEAMG1:812226..813161
Genome browser
AA seq
311 aa
AA seq
DB search
MKRKKEPGPLNQLEAEIAITALHATGEYQVLRKINLERDHRLRGLHGEGARIGLCLDTET
TGLDHRQDRIIELGIVAFAYDPVTAEILRVTGRYNGFEDPGAPLAREITEITGITDDMVR
GQALDDEQVMALVAGADLVIAHNAAFDRPFVEARYPAFAGIPWACSVLQIDWQAERLQAR
SLEYLLFKFGWCINAHRALDDAEGVLGLLLERLPVSDRSVFAALLEGSRQSATRIHAVGA
PFDKKELLKQRGYRWHDGADGKPKCWWIGIVDTREQEELAFLAREVYGGTLPGGVTVRRI
GPLDRFSVREG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaacggaagaaggaaccggggccgctgaaccagcttgaagcggagatcgccatcacg
gcactgcacgccaccggcgaataccaggtgctgcgcaagatcaacctggagcgggatcat
cgcctccggggcctacatggcgagggtgcccggatcggtctctgtctcgacaccgagacc
accggcctggatcaccgccaggaccggatcatcgagctggggatcgtggccttcgcgtac
gacccggttaccgccgaaatcctgcgggtgacgggccgctacaacggttttgaggacccg
ggcgccccccttgcccgcgagatcacggagataaccggcattaccgatgacatggtacgg
ggacaggcgctggacgacgaacaggtcatggcgctggtggccggggccgatctggtgatc
gcccataacgccgcctttgatcgtccctttgtggaggcccggtacccggcctttgcgggg
attccctgggcctgttcggtgctgcagatcgactggcaggccgagcggctgcaggcccgc
tccctggagtacctgctgttcaagttcggctggtgcatcaacgcccaccgggccctggac
gatgccgaaggggtgctggggctcctgctggagcgtctgccggtgagcgaccggtcggtg
ttcgcggcactcctggagggaagccgccagtcagccacccgcatccatgcggtgggagcc
ccctttgacaagaaggaactgctcaaacagcgcggctaccgctggcatgacggtgcggac
ggcaaacccaagtgctggtggatcggtatcgttgataccagggaacaggaagagttggca
ttcctggcccgtgaggtgtacggcggcaccctgcccggcggggtgaccgtccgccggatc
gggccgctggaccgtttctcggtgcgggaaggctag
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