Trichlorobacter ammonificans: GEAMG1_0955
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Entry
GEAMG1_0955 CDS
T09459
Name
(GenBank) ABC transporter, ATP-binding/membrane protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
tamm
Trichlorobacter ammonificans
Pathway
tamm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GEAMG1_0955
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tamm02000
]
GEAMG1_0955
02044 Secretion system [BR:
tamm02044
]
GEAMG1_0955
Transporters [BR:
tamm02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
GEAMG1_0955
Secretion system [BR:
tamm02044
]
Type I secretion system
Adhesin protein transporter
GEAMG1_0955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_29
AAA_30
ATPase_2
Phage_r1t_holin
AAA_16
AAA_5
AAA_22
NACHT
BCA_ABC_TP_C
AAA_28
AAA_23
Motif
Other DBs
NCBI-ProteinID:
CAH2030769
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All DBs
Position
GEAMG1:complement(980224..982392)
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AA seq
722 aa
AA seq
DB search
MKTDGQEETVIFGESGMATPITAAVLGRLLLKRGLAVPPGELEQACAATQQEGVEQKPAE
RVSRILLAAGLKNIKVAQLRWERFDHRHLPALLLHNGCWQLAEHGDAGVLLLTAADGTVS
RVANGELVDAVVLWLRVERPETPAGELLKSSASQMLLRELLRDKRWLLEVGVATVVVNLL
AVATSLFSMQVYDRVVPTFAYATLWAMVAGMVIMVLLDWVLKFIRSRILDEVAKRVDIAL
SQQLYEHLLDLRLDKRPRSLGSLAAQMNGLETVRTFFSSTIVFAMTDLPFGLMFIVFIAA
IGGMISTVYLALLPVSLLLGWLAQRQLRTLARLEIQRGHERHGLLVDTIQGAETIQSSGS
GWFFADLWRSITASMAAYSLKSKLISSLTTTTTATLSTVGYVAAVVVGVLLIEAGQLTTG
GLIACTILGGKVIGPIAQSVGILVQWQHVREALEMVNRLLALEGNRPEGKVLLVPETLPD
RLELEGVRFAYPGTPVIRLQVETLAFGPGDRVVVMGPNGCGKSTLLKLAAGLYKPAEGQV
KLGGADIWELDPQVLGERIGYLPQDVHLFKGTLKNNIMLAGGINDARFLEVAELLGLDRV
AADSPRSMDTEISEGGQGLSGGQRQLTAISRIFLARPRVWLLDEPSASLDTESEERVLKA
LQSHTRPTDIVLIATHRPRLLSLANRLLIMRRGQVIADGPPAEVIQAMQAAQAAQNASGS
TP
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacggacggacaggaagaaaccgtcatattcggcgaaagcggtatggcaaccccc
atcacggcggcggtcctgggcaggctgctgctcaagcgcggccttgccgtgccccccggc
gaacttgaacaggcctgcgctgccacccagcaggaaggcgtggaacagaagccggcggaa
cgggtctcccgcattctgctggctgccggcctcaagaacatcaaggtggcgcaactgcgc
tgggaacgtttcgatcatcgccacctgccggcgctgctgctgcataacggctgctggcaa
ctggcggagcacggcgacgcgggtgtcctgctcctcaccgctgccgacggcaccgtcagc
cgggtcgccaacggcgaactggtcgatgcggtggtgctctggctacgggtggagcggccg
gaaacccctgccggtgaactgctgaaaagcagcgcctcgcagatgttgctcagggaactg
ctgcgggacaagcgctggttgctggaggtcggcgtggccaccgtggtggtcaacctgctg
gcggtggccacctcccttttctccatgcaggtctacgaccgggtggtgcccacctttgcc
tacgccaccctctgggccatggtggccggcatggtgatcatggtgctgctggactgggtg
ctgaagtttatccgctcccgcatcctggacgaggttgccaagcgggtggatatcgccctg
tcccagcaactctacgaacacctgctggatctgcgcctggacaagcgcccccgcagcctg
ggctccctggccgcccagatgaacggcctggaaacggtgcgcaccttcttctcctccacc
atcgtcttcgccatgaccgacctccccttcggcctgatgttcatcgtgttcatcgccgcc
atcggcgggatgatcagcacggtctacctggcgctgctgccggtatccctgctgttgggc
tggctggcccagcgccagctgcgtacccttgcccgcctggaaatccagcggggtcacgag
cgccacggcctgctggtggacacgatccagggggcggaaaccatccagtccagcggcagc
ggctggttcttcgccgacctgtggcgcagtatcaccgcgagcatggccgcttactccctg
aagagcaagctgatcagcagcctcaccaccaccacgaccgccaccctgagcacggtgggc
tacgttgccgccgtggtggtgggggtcctgctgatcgaagccggccagctcaccaccggc
ggcctgatcgcctgcaccatcctgggcggcaaggtgatcggccccatcgcccagagcgtg
ggcatcctggtgcaatggcagcatgtgcgcgaagccctggaaatggtcaaccgcctgctg
gccctggaggggaaccgccccgaggggaaagtgctgctggtccccgaaaccctgccggac
cggctggagcttgaaggggtccgcttcgcctaccccggtacgccggtgatacgcttgcag
gtggagaccctcgccttcggaccgggcgaccgggtggtggtgatgggacccaacggttgc
ggcaagtccaccctgctcaagctggcggcggggctgtacaaaccggcggaaggacaggta
aagctggggggggccgacatctgggaactggacccgcaggtgctcggcgaacggatcggc
taccttccccaggacgtccatctctttaaggggaccctcaaaaacaacatcatgctggcc
ggcggcatcaacgatgcccgcttcctggaggttgcggaactgctgggactcgaccgggta
gcggcggacagtccccgcagcatggacacggaaatcagcgaagggggccaggggctctcc
ggcggccagcgccagttgaccgccatctcccgcatcttcctggcacgtccgcgggtctgg
ctgctggatgagccgtcggcctcccttgacacggaatcggaggaacgggtattgaaagcg
ctgcaaagccacacccggcccacggacatcgtgctgatcgccacccaccgtccccgcctg
ctctccctggccaaccggctgctgatcatgcggcggggccaggtgatcgccgacggccca
ccggcggaggtgatccaggccatgcaagccgcccaggccgcccagaacgcttccgggagc
acaccatga
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