Trichlorobacter ammonificans: GEAMG1_0967
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Entry
GEAMG1_0967 CDS
T09459
Name
(GenBank) MiaB family protein, possibly involved in tRNA or rRNA modification
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
tamm
Trichlorobacter ammonificans
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tamm03016
]
GEAMG1_0967
Enzymes [BR:
tamm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
GEAMG1_0967
Transfer RNA biogenesis [BR:
tamm03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
GEAMG1_0967
Prokaryotic type
Methylthiotransferases
GEAMG1_0967
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
B12-binding
VWA_3
LPG_synthase_C
Motif
Other DBs
NCBI-ProteinID:
CAH2030781
UniProt:
A0ABM9D6A5
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All DBs
Position
GEAMG1:complement(1011484..1012767)
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AA seq
427 aa
AA seq
DB search
MQQTDRLKTFAIATLGCKVNQFESADMIEQLRNAGWKQVSFNEAADLYLVNSCTVTGKSD
AESRKLLRRARRANPDATVVATGCYAQVSPEALQALAEVDQVLGNREKVDILRHITLGAD
QVSSLTEQLEGPSLKLTSFADHTRAFLQIQSGCENGCSYCIVPIARGPNRSVAVTDVEEA
VRRLAGEGYREVVLTGIHLGAYQSGLTGLLRRLDATGAVERLRLGSLEPNELSDELLELI
AGSSRICPHLHLPLQSGSDTVLHRMRRRYDAALYRQVVEKVAQRLPDAFLAADVIAGFPG
ETEQEFRETCDLIAALPLADLHVFPYSRRPGTVAAAMPDQLPPAVIKERTTILNRLAAVK
LKLFRQRFIGSHLEVLGQRHDPATGLISGLSRNYLEIDCPGTADDINRLRMVRVTALSRN
RLVGEPA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagacagaccgtcttaaaacatttgccatcgccaccctcggctgcaaggtcaat
cagtttgaatctgccgacatgatcgaacagttgcgcaacgccggctggaaacaggtcagc
ttcaacgaggcggctgatctctacctggtgaacagttgcaccgtcaccggcaaaagtgac
gccgaatcccgcaagctgttgcgccgggcccgccgggccaacccggacgccaccgtggtg
gccaccggctgctatgcccaggtatcccccgaagcgttgcaggcacttgccgaagtggac
caagtgctgggtaaccgggaaaaagtcgatattctccgccacatcacgctgggtgccgac
caggtcagttccctgaccgaacagctcgaaggcccatcactgaagttgaccagttttgcc
gaccacacccgtgctttcctgcagatccagagcggctgcgaaaacggttgcagctactgc
atcgtgccgattgcccgcggtccgaaccgctccgtggccgtcaccgacgtggaggaggcg
gtgcgacggctggcaggggaagggtaccgcgaggtggtgctgaccggcatccacctgggg
gcctaccagtccggcctgaccggcctgctgcgccgtctcgacgcgaccggggcggtggag
cgcctgcggctgggctccctggaacccaacgaactgagcgacgagctgctggagctgatt
gccggctcgtcccgcatctgcccccacctgcacctgccgctgcagagcggatcggatacg
gtgctgcaccggatgcggcgacggtacgacgccgccctctaccgccaggtggtggagaag
gtggcacaacggctgccggacgccttcctggcggcggacgtcattgccggcttccccggc
gaaaccgagcaggagttccgggaaacctgcgacctgatcgccgccctgcccctggccgat
ctgcacgtcttcccctattcgcgccgtcccggcaccgttgcggcggccatgccggaccag
ctccccccggcagtgatcaaggagcggaccacgatcctgaaccgtctggctgcggtcaaa
ctgaagctgttccgccagcgtttcatcggcagccacctggaggttctgggacagcggcac
gacccggcaacgggtctcatcagcgggctttcccgcaactatctggagatcgactgcccc
ggcacggccgacgatatcaacagactgcgcatggtcagggtcaccgcgctttcccgcaac
cgcctggtcggtgaaccggcctga
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