Trichlorobacter ammonificans: GEAMG1_1039
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Entry
GEAMG1_1039 CDS
T09459
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tamm
Trichlorobacter ammonificans
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tamm03016
]
GEAMG1_1039 (truB)
Enzymes [BR:
tamm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GEAMG1_1039 (truB)
Transfer RNA biogenesis [BR:
tamm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GEAMG1_1039 (truB)
Prokaryotic type
GEAMG1_1039 (truB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
CAH2030853
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All DBs
Position
GEAMG1:complement(1086762..1087640)
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AA seq
292 aa
AA seq
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MVDGFLVIDKPAGITSHDVVSRVRRLAGTRRVGHTGTLDPFATGVLPVAVGEGTKAIPFL
DEGEKEYEAELLLGTVTDTLDHTGTVLQQSDWSTVTESALLERMAELTGTISQVPPMYSA
IKQGGQPLYKLARKGVEVERQPRQVTIYRFDLLTCTLPTVTVRVRCSRGTYIRSLADDLG
RLVGCGACLSALRRTRSGPFAISTAITLEELASLAAADCLSSVLVSPREALNHLPEIVLE
QEQAELVFHGRLPNLGFQDGPRRLTHDGRLVAVTELDQEQRPVLRRVFHGNG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
gtggtagacggctttctggttatcgacaagccggcaggcatcacctcccacgacgtggtg
agccgggtcaggcgactggcgggtacccggagggtcggccacaccggcaccctggacccc
tttgccaccggtgtgttgccggttgcggtgggtgagggaaccaaggcgatcccctttctc
gatgagggggaaaaggagtacgaggcagagctgctgctgggcaccgtcaccgacaccctg
gaccacaccggcaccgtcctgcaacaatccgattggagcacggtaacggaatccgccctg
ctggagcggatggccgagctgaccggcaccatcagccaggttcccccgatgtattcggcc
atcaagcagggggggcagccgctctacaagctggcccgcaagggggtggaggttgaacgg
cagccgcggcaggtgaccatttaccgtttcgacctgctcacctgtactctgccgaccgta
acggtacgggtgcgctgctcccgcggcacctacatccgttccctggcggacgacctggga
cgactcgtgggctgcggtgcctgcctctccgctctacgccggacccgtagcggaccgttt
gcaatcagcaccgccattacccttgaggaactggcgtcgctggcagcagccgactgcctg
tcgtcggtgctggttagcccgcgggaggccctgaaccatctgccggaaatcgttcttgag
caggagcaggctgagctggtgttccacggcagattgccgaacctgggtttccaggacggc
cctcgccgcctgacccacgacggccgcctggtggcggtgacggaactggaccaggagcag
cgtccggtgttgcggcgggtatttcacgggaatggataa
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