Trichlorobacter ammonificans: GEAMG1_1040
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Entry
GEAMG1_1040 CDS
T09459
Name
(GenBank) Putative phopsphoesterase or exonuclease
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
tamm
Trichlorobacter ammonificans
Pathway
tamm00920
Sulfur metabolism
tamm01100
Metabolic pathways
tamm01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
GEAMG1_1040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tamm03400
]
GEAMG1_1040
Enzymes [BR:
tamm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
GEAMG1_1040
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
GEAMG1_1040
DNA repair and recombination proteins [BR:
tamm03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
GEAMG1_1040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
CAH2030854
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All DBs
Position
GEAMG1:complement(1087634..1088602)
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AA seq
322 aa
AA seq
DB search
MMTETIRNIVEAIRESRNALVVSHEGPDGDAVGSSLGLAAFLRAIGKEVVVHLADPVPEL
YRFLPGADLVTAVIPDRDFDLAFVLDVGEFRRAGQQFCSFGRIGRIINLDHHLTCEQFGF
INLIDVEAAATANLVWRVAAAYGFSPDYATALCLYVGILTDTGSFRYSNANREAFTVAGE
LLEAGGFTAWDVSEKLYESQPRKRLELLVRALPTLEFIRNGQAASLTVTTEMYAATGADA
ELTDGFVNYPRSVQGVEVAIFFRQLDERRFKVGFRSKGAVNVATIARQFGGGGHHNAAGG
IVEGTLDEVKRIVYGAVESIQW
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgatgacggaaacgatccggaacatcgttgaagcgatccgggaaagccggaacgccttg
gtggtcagccacgaaggacccgacggcgatgccgtcgggtcgagtctcggtctggccgcg
tttctcagggccatcggcaaggaagtcgtggtccatctggccgatccggtgccggaactg
taccgttttctccccggtgcggacctggtcactgccgttattcccgaccgcgacttcgat
ctcgccttcgtgctggacgtgggtgaattccgccgggcgggtcagcagttctgttccttc
ggccgtatcggccgcatcattaacctggaccaccacctgacctgcgagcagttcggcttc
atcaacctgatcgacgttgaggccgccgccaccgccaacttggtctggcgggtcgccgcc
gcctacggtttttcgccggattacgccacagccctctgcctctacgtgggcatcctgacc
gacaccggctccttccgctactccaatgccaaccgggaagcgttcaccgttgccggtgaa
ctgctggaagccggcggcttcaccgcctgggatgtctcggaaaagctgtacgaaagccag
ccgcgcaaacggctggagctgttggtccgcgccctgcccactttggaattcatccgtaac
ggccaagccgcctccctgacggttaccacggagatgtacgcggcaaccggagccgatgcg
gagctgaccgacggtttcgtcaattatccccgctcggtacagggagtcgaagtagccatt
ttcttccgccagttggacgaacggcgcttcaaggtcggtttccgctccaagggggcggtg
aatgtggcaaccattgcccggcaattcggcggcggtggccatcacaacgcagctggcggc
atcgtggaaggaaccctcgacgaggtcaagcgtatcgtctacggcgcggttgaatcgatt
cagtggtag
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