Trichlorobacter ammonificans: GEAMG1_1189
Help
Entry
GEAMG1_1189 CDS
T09459
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
tamm
Trichlorobacter ammonificans
Pathway
tamm00260
Glycine, serine and threonine metabolism
tamm00630
Glyoxylate and dicarboxylate metabolism
tamm00670
One carbon pool by folate
tamm00680
Methane metabolism
tamm01100
Metabolic pathways
tamm01110
Biosynthesis of secondary metabolites
tamm01120
Microbial metabolism in diverse environments
tamm01200
Carbon metabolism
tamm01230
Biosynthesis of amino acids
tamm01240
Biosynthesis of cofactors
tamm04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GEAMG1_1189 (glyA)
09102 Energy metabolism
00680 Methane metabolism
GEAMG1_1189 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GEAMG1_1189 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
GEAMG1_1189 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
GEAMG1_1189 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
GEAMG1_1189 (glyA)
Enzymes [BR:
tamm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
GEAMG1_1189 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
CAH2031003
LinkDB
All DBs
Position
GEAMG1:1248014..1249261
Genome browser
AA seq
415 aa
AA seq
DB search
MSVLATFDPEIAAAIRHETERQEYNLELIASENFVSEAVLEAQGSVMTNKYAEGYPGKRY
YGGCHHVDVAEQLAIDRAKELFGAEHANVQPHSGSQANMAVFNAVCQPGDTILGMNLSHG
GHLTHGSPVNFSGRFYKVVPYGVSPDTETIDYAEVERLAEEHRPKMIIVGASAYPRILDF
AAFRAIADKVGAVVMVDMAHIAGLVAAGVHPSPIPYAEFVTTTTHKTLRGPRGGMILCRE
EFAKTLNSQIFPGIQGGPLMHVIAAKAVAFKEALQPEFKQYQQQIVKNAKVLSEALIKRG
FKLTSGGTDNHLMLINFTGTEITGKAAEEALDKAGITVNKNTVPFETRSPFVTSGIRIGT
PACTTHGLKEAEMEQVAGFIADAVANIGNDGKLGEVKQRVNELMKRFPLYAARLK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtactagctacgtttgatccggaaatcgccgcggcgatccgtcacgaaaccgaa
cgtcaggagtataacctcgagctgattgcctccgaaaacttcgtctccgaagcggtgctg
gaggcccagggatcggtgatgaccaacaagtatgccgaagggtatccgggcaagcggtac
tacggcggctgtcaccatgtggatgtggcggagcagttggccatcgaccgggccaaggaa
ctgttcggcgccgagcatgccaacgtccagccccattccggctcccaggccaacatggca
gtattcaacgccgtctgccagcccggcgatacgattctggggatgaatctttcccacggc
ggccacctgacccacggcagcccggtcaacttctccggccggttctacaaggtggttccc
tacggcgtctccccggataccgagaccatcgactatgccgaggtggagcgcctagcggaa
gagcaccgtcccaagatgatcatcgtaggggccagcgcctatccccggattctcgatttc
gccgcattccgggccattgccgacaaggtgggggccgtggtgatggtggatatggcccac
atcgccggtctggttgccgccggggtacatcccagcccgattccctacgccgagttcgtg
accaccaccacccacaagaccctgcgcgggccccggggagggatgattctgtgccgtgag
gagtttgccaagaccctcaactcgcagattttccccggtatccaggggggaccgctgatg
catgtgatcgctgccaaggcggtggcgttcaaggaggcgctgcagccggaattcaaacaa
tatcagcagcagatcgtgaagaacgccaaggtgctgtcggaagccctgatcaagcgcggc
ttcaagcttacctccggcggtaccgacaaccacctgatgctgatcaacttcaccggcacc
gagatcaccggcaaggcagcggaagaagcgctggacaaggccggtatcacggtcaacaaa
aacacggtgccgttcgaaacccgctcacccttcgttacttccggtatccggatcggtacg
ccggcctgcaccacccacggcctgaaagaagcggaaatggagcaggtcgccggtttcatt
gccgacgccgtcgccaatatcggcaatgacggaaaactgggcgaggtcaagcagcgggtg
aatgagctgatgaagcggtttccgctctacgcggcgcgcctgaaataa
DBGET
integrated database retrieval system