Trichlorobacter ammonificans: GEAMG1_1478
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Entry
GEAMG1_1478 CDS
T09459
Symbol
phr
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
tamm
Trichlorobacter ammonificans
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tamm03400
]
GEAMG1_1478 (phr)
Enzymes [BR:
tamm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GEAMG1_1478 (phr)
DNA repair and recombination proteins [BR:
tamm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GEAMG1_1478 (phr)
Prokaryotic type
GEAMG1_1478 (phr)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CAH2031308
LinkDB
All DBs
Position
GEAMG1:1565670..1567016
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AA seq
448 aa
AA seq
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MIDPRRIHLLNNCPEQTGPVLYWMSREQRVADNWGLCHAQQLALKRRQALVVVFTLADSF
LGATLRQYGFMLRGLEQVRQQLAKLNIPFVLLRGEPRTELLRFIGASGAGCVVCDFDPLR
IKRTWREGAAAAATVPFIEVDGHNIVPCRVASPKREYGAYTLRPKLHRLLPEFLTPLPRL
ERHPFPWSPPLRQEPFDLDRLLSELPCDRSVPEVSGFMPGEEAAAEALADFITTRLPGYA
LRRNDPCANGQSGLSPWLHFGQLSPQRVALAATAGNSDPDREAFLEELIVRRELADNFCW
HCPGYDRLDAAPDWARATLEQHRHDPRPWCYGQDELEHAASHDPLWNAAQRELTTTGKMH
GYLRMYWAKKILEWSASPEEALAHAIFLNDRYALDGRDPNGYAGIAWSVCGVHDRAWGRR
PIFGTIRYMSFEGCRRKFDVARYSATVY
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatccccgccgcatccacctcctgaacaactgcccggaacagaccggcccggtg
ctctactggatgagccgggagcagcgggttgccgacaactgggggctctgccacgcccag
caactggccctgaaacggcggcaagcgctggtggtggttttcaccctggcggacagcttt
ctgggggccaccctgcgccagtacggcttcatgctgcgggggctggagcaggtgcggcag
cagctggcaaaactgaatatcccctttgtgctgctgcggggggagccccggacagagctg
ctgcgctttatcggggccagcggggccgggtgcgtggtctgcgacttcgacccgttgcgg
atcaagcgcacctggcgcgagggggctgcggccgcggcaacggtgccgttcatcgaggtg
gacggccacaacatcgtcccctgccgtgtggcctcccccaagcgggagtacggcgcctac
accctgcggcccaagctgcaccggctgctgccggagtttttgacgcccctgccccggctt
gaacgtcacccttttccctggagcccccccctgcggcaggagccctttgacctagaccgg
ctgctgtccgagttgccctgcgaccgttcggttcccgaggtaagcggcttcatgcccggc
gaagaggctgccgccgaagccctggccgatttcatcaccacccgtctgcccggctatgcc
ctacgccgtaacgacccctgcgccaacggccagtccggcctttccccctggctgcatttc
ggccagctctctccccagcgggtggccctggccgcgactgccggcaacagcgatcccgac
cgggaagcgttcctggaagagctgatcgtgcggcgggagctggcggacaacttctgctgg
cactgccccggctacgaccgtctggatgcggcgccggactgggcccgcgccaccctggag
cagcaccgacacgatccccgtccctggtgctacgggcaggatgagctggagcacgccgcc
agccacgacccgctctggaacgcggcgcaacgggagctgacgaccaccggcaagatgcac
gggtacctgcggatgtactgggccaagaaaatcctggagtggtccgcctcgccggaagaa
gccctggcccacgccatcttcctgaacgaccgttacgccctggacggccgcgatcccaac
ggctacgccggcatcgcctggtccgtctgcggcgtccacgaccgggcctggggccgccgc
cccatcttcggcaccatccgctacatgagctttgagggctgcagacgcaagttcgacgtg
gcccgctacagcgcaaccgtgtactag
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