Trichlorobacter ammonificans: GEAMG1_1620
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Entry
GEAMG1_1620 CDS
T09459
Name
(GenBank) Spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
tamm
Trichlorobacter ammonificans
Pathway
tamm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GEAMG1_1620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tamm02000
]
GEAMG1_1620
Transporters [BR:
tamm02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
GEAMG1_1620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
CAH2031452
LinkDB
All DBs
Position
GEAMG1:1731417..1732484
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AA seq
355 aa
AA seq
DB search
MPHGVKKLVLSLMLLTVIFCSVLCFIPAEAGEQPLRVLAWPGYADPDIVKTFEQRTGARV
EVTFVGTDLELWTKLSRNNGRDFDVFAVNTAELQRYIAKGLVSGIPVQEISNRSKQLPRF
RDLNSIRGIVHNGTVYAIPYTYSEMGLIYDRQQLKKAPESITALWDKQYRGKVIAYNAGV
HNFSLAAQTLRLSSPFSIPPADIPAVVDRLIALRRNVTGFYTQPEESVAMFKNRKAALMF
ANFGTQQVQLLKKAGVDAGYALPKEGALAWLDCWAITREAKNKKLAAAWINYLLDDLPGK
ALTSRQGLANTTAESPSITPEKLILWLEPVEDEARRDQLWGRIVSGSSAAKVLAP
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgccgcatggtgtgaaaaagctggtgctctctctgatgctgttgaccgtcatattctgc
tccgtactctgtttcataccggccgaggctggggaacaaccgctgcgggtgctggcatgg
cccgggtatgcggaccccgatatcgtcaagacctttgagcagcgcacgggggccagggtg
gaggtaacctttgtcggcaccgacctggagctgtggaccaagctcagccggaacaatggt
cgggattttgatgtttttgccgtgaacaccgcagaactgcaacgctatattgctaaaggt
ctggttagcggcattccggtgcaagagatttcaaaccgctcgaaacaactccccagattc
cgtgatttaaacagcatacgcggcatcgtgcacaatggcacggtgtacgccatcccctat
acctactcggagatggggctgatctatgaccggcaacaactcaaaaaggcgccggaaagc
attacagcactctgggacaagcagtaccgcggcaaagtgatcgcctacaatgccggggta
cataatttttctttggcggcacagacgctgcgcctctcctccccgttcagcataccgccg
gcagacataccggcggttgtcgatcggttgatcgccctgcgccgaaatgtaaccggcttt
tatacacagccggaagaatcagtcgccatgttcaagaatcgcaaagctgccttaatgttt
gccaactttggcacgcagcaggtgcaactgctgaaaaaagccggcgtcgatgccggttat
gcgcttcccaaagagggcgctctggcttggctggattgctgggccatcactcgcgaagcg
aaaaacaaaaaactggccgcagcctggatcaactacctgctggacgatctgccgggaaag
gcattgacaagccgtcaggggttggccaacaccacagcggaatcgccctctatcacacca
gaaaagctgatactctggctggagccggttgaagacgaagctcgccgcgatcaactgtgg
ggcagaatcgtttcaggcagctctgctgcaaaggtgctggccccttga
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