Trichlorobacter ammonificans: GEAMG1_1777
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Entry
GEAMG1_1777 CDS
T09459
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII subunit XseB
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
tamm
Trichlorobacter ammonificans
Pathway
tamm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GEAMG1_1777 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tamm03400
]
GEAMG1_1777 (xseB)
Enzymes [BR:
tamm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GEAMG1_1777 (xseB)
DNA repair and recombination proteins [BR:
tamm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GEAMG1_1777 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_TAC_11
Tropomyosin
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
CAH2031609
LinkDB
All DBs
Position
GEAMG1:1906105..1906353
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AA seq
82 aa
AA seq
DB search
MAAEKFEASLKKLEEIVRRLENGTLPLDDAIKAFEEGVRHASLCARKLDEAERKVELLIK
QRNGSFRRAPFTAENGDDDTER
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggagaaatttgaagcatccctgaaaaaactcgaagagatcgtcagaaggctg
gagaacggcacgctgccgctggatgatgccatcaaggcctttgaggagggggtgcgacat
gcgtccctctgcgcgcgcaaacttgacgaggcggagcggaaggtggaactgctgatcaag
cagcgcaacggctccttccgtcgggccccctttaccgccgaaaatggcgacgatgacacg
gaaaggtaa
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