Trichlorobacter ammonificans: GEAMG1_1818
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Entry
GEAMG1_1818 CDS
T09459
Symbol
oppF
Name
(GenBank) murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppF
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
tamm
Trichlorobacter ammonificans
Pathway
tamm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GEAMG1_1818 (oppF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tamm02000
]
GEAMG1_1818 (oppF)
Transporters [BR:
tamm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
GEAMG1_1818 (oppF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
Sigma54_activat
nSTAND1
PRK
AAA_22
AAA
RsgA_GTPase
AAA_16
AAA_29
ATP-synt_ab
NACHT
CbiA
AAA_25
Rad17
nSTAND3
Mg_chelatase
AAA_5
RNA_helicase
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
CAH2031650
LinkDB
All DBs
Position
GEAMG1:complement(1952505..1953479)
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AA seq
324 aa
AA seq
DB search
MKRSMLRAEDVSKRYVLKDAVGRKAVLTAVDRVSLTVEEGETLGIAGESGCGKSTLARIM
AGLLAADAGSVSFEGVALADLGPEGQRQFRRAVQMVFQDPFSSLNPRLRIGDAIAEPIHI
HGLAPRAALRDATTALMAQVGLSADQYDRFPHEFSGGQRQRIGIARALAAQPRLLLADEP
VSSLDISIQAQIINLLQELKHRHGLTMAMISHDLGVLRHVSDRIAVMYLGAVVEVAPTPE
LFTSSRHPYTRLLLSAIPRIRREREAALTEPPGGDPPSPTALPSGCRFHPRCPHAAERCR
VEAPLLTDQGPGHRAACHFASSLF
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgttcgatgctgcgggcggaggatgtttccaagcggtacgtcctgaaggatgcc
gttggcaggaaggcggtgctgaccgccgtggaccgggtcagcctgacggttgaggaggga
gagaccctgggcattgccggggagtcggggtgcggcaagtcaaccctggcccggatcatg
gccggcctgcttgccgccgatgccgggtcggtcagcttcgaaggggtagcccttgccgac
ctggggccggagggacagcggcagttccgtcgcgcggtgcagatggtgtttcaggacccc
ttctcgtcgctcaatccccgcctgcggatcggcgatgccattgccgagccgatccatatc
catggcttggccccgcgagctgcgctgcgcgacgcgaccacggccctgatggcacaggtg
ggcctctccgccgaccagtacgatcgttttccccacgaattttccggcggccagcgtcaa
cggatcggcatcgcccgcgccctggctgcccagccgcggctgttgctggccgacgaaccg
gtctcctcgctggatatctccattcaggcccagatcatcaatctgctgcaggagctgaag
caccgccacggtctgaccatggccatgatcagccatgacctgggggtgctgcggcatgtc
agcgaccggatcgcggtcatgtacctgggagcagtggtggaagtggctccgacgccggag
ctgttcaccagcagccgccatccctacacccgtctgctcctgtccgccatcccccgcatc
cgccgggagcgggaggcagcgctcacggagccgcccggcggcgatccgccgtcccccacc
gccctgccgtcgggctgccggttccatccgcgctgcccccacgctgccgagcgctgccgc
gtcgaagcgccgcttttgaccgaccaggggccgggacaccgtgccgcctgccacttcgcc
tcctcgctcttctga
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