Trichlorobacter ammonificans: GEAMG1_1962
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Entry
GEAMG1_1962 CDS
T09459
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
tamm
Trichlorobacter ammonificans
Pathway
tamm00521
Streptomycin biosynthesis
tamm00523
Polyketide sugar unit biosynthesis
tamm00541
Biosynthesis of various nucleotide sugars
tamm01100
Metabolic pathways
tamm01110
Biosynthesis of secondary metabolites
tamm01250
Biosynthesis of nucleotide sugars
Module
tamm_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GEAMG1_1962 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GEAMG1_1962 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GEAMG1_1962 (rfbC)
Enzymes [BR:
tamm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GEAMG1_1962 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
BioG
Motif
Other DBs
NCBI-ProteinID:
CAH2031797
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Position
GEAMG1:2101740..2102285
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AA seq
181 aa
AA seq
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MNCLTTALPGVLLLEPKVFGDDRGFFFESFNQRVWQQVTGLKVAFVQHNHSRSARNVLRG
LHYQIRRPQGKLVRVIAGEVFDVAVDIRRSSPTFGQWFGTLLSAENKRQVWIPAGFAHGF
CVTSDHAEFLYLTTDYWAPEHERCIAWNDPSIAIDWPLAGEPLLSAKDMTGTPLEQADLF
D
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtctcaccacagcgctgcccggcgtactgctgctggaaccgaaggtctttggc
gacgaccgcggcttcttcttcgaaagcttcaatcagcgggtctggcagcaggtgaccggc
ctcaaggttgcctttgtccagcacaaccactcccgctcggccagaaacgtcctgcgcggc
ctgcattaccagatccgccgcccccaggggaagctggtgcgggtcattgccggcgaggtg
ttcgacgtggccgtggatatccgccgttcctcccccaccttcggtcagtggttcggcacc
ctgctctccgcagagaacaagcgccaagtgtggataccggcagggtttgcccacggtttc
tgcgtcacttccgaccatgccgagttcctctacctgaccaccgactactgggcgccggag
cacgagcgctgcatcgcctggaacgatccgtccatcgctattgactggcccctggccggc
gagccgctgctctccgccaaggatatgacggggaccccgcttgagcaggccgacctgttt
gactga
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