Trichlorobacter ammonificans: GEAMG1_1984
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Entry
GEAMG1_1984 CDS
T09459
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tamm
Trichlorobacter ammonificans
Pathway
tamm03030
DNA replication
tamm03410
Base excision repair
tamm03420
Nucleotide excision repair
tamm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GEAMG1_1984 (polA)
03410 Base excision repair
GEAMG1_1984 (polA)
03420 Nucleotide excision repair
GEAMG1_1984 (polA)
03440 Homologous recombination
GEAMG1_1984 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tamm03032
]
GEAMG1_1984 (polA)
03400 DNA repair and recombination proteins [BR:
tamm03400
]
GEAMG1_1984 (polA)
Enzymes [BR:
tamm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GEAMG1_1984 (polA)
DNA replication proteins [BR:
tamm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GEAMG1_1984 (polA)
DNA repair and recombination proteins [BR:
tamm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GEAMG1_1984 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GEAMG1_1984 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
CAH2031819
LinkDB
All DBs
Position
GEAMG1:complement(2125998..2128775)
Genome browser
AA seq
925 aa
AA seq
DB search
MNTTLYLIDGSSYLYRAYFAIKRLSSPSGFPTNAIYGFTQMLLKLLKDYKPEHLAMVFDV
GRVTFRTELYPAYKANREEMPADLRQQLEPIRDLVRAFNIPVVELAGYEADDLIGTLAAR
WEASGGTVVVVTGDKDLMQIVTGRTTLLDTMKNTASDIPQVQERFGVGPEKVIDILGLAG
DSSDNIPGVPGIGEKTAIKLIQQFGSLDALLERAAEVPGKTGEKLREFAEQARLSRRLAT
IVRDVPYDLNPEELAAREPDTARLHELFSEYGFFSLIKELTARATLQSDRYHCVQTPEQL
ERLVTRLEEAPAFAFDTETTGLDPRTASLVGISIALEPHEAFYIPVGHRSPLPASPPPGE
GDLFAFSEQRNDDADSSPQRGEVGRGGGLSPGQLSRDLVLDRLRPVFGNPSVRKVGQNLK
FDLQVLDTAGIEVQGSWCDTMLCSYLLNPSRGGHGLDALAQEHLNHRMISYDEVTGTGRN
RINFSEVGLEEATRYACEDADVTWLIHEKLLPMVREAGQEELLFGLEMPLMAILTRMERY
GVLLDREFLGRLSEDFGSQMARLETQIHELAGGPFNLNSPKQLGEVLFEKLGLATAKKTK
GKTGWSTDNEVLTSLAEEHEIPRLLLEYRGLAKLKSTYADALVRLADDSGRVHTSYNQAV
TSTGRLSSSDPNLQNIPIRTEEGRRIREAFIAPAGSVILAADYSQVELRVLAHLSSDPVF
CQAFGNDEDIHTRTASEIFGLFPEMVTSEMRRQAKTINFGVIYGQGAFSLAKQLGVARNV
AEKFIAAYKERHSGAMGFLDRCVQQAREQGYVTTILGRKLPIADIASANHNLRSFAERNA
INYPIQGSAADIIKQAMLGVERAIAAEGLQSRLIMQVHDELVFEVPEGELAAMKVLVERE
MSQAVPLQVPLKVDMNFGKNWSEAH
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccaccctctacctgatcgacggttcttcctatctctaccgggcctatttcgcc
atcaagcggctgtcgtcccccagcggttttcccaccaacgccatctacggttttacgcag
atgttgttgaagttgctgaaggattacaagccggagcatctggccatggtgttcgacgtg
gggcgggtcacgttccgcaccgagctgtacccggcctacaaggccaaccgcgaggagatg
cctgccgacctgcgccagcaactggagccgatccgcgatctggtgcgggcctttaatatc
ccggtggtggaactggccgggtacgaggccgacgacctgatcggcaccctggcggcccgc
tgggaggcttccggcggcacggtggtggtggtgaccggcgacaaggatctgatgcagatc
gtcaccggccggaccacactgctggacaccatgaagaacacggcctcggatatcccccag
gtgcaggagcgtttcggggtggggccggaaaaggtgatcgatatcctggggcttgccggg
gacagttcggacaacatccccggcgtgccggggatcggcgagaagaccgccatcaagctg
atccagcagttcggatcgctggatgccctgctggagcgggccgctgaggtgccgggcaag
accggcgaaaaactgcgggagtttgccgagcaggcccggttgtcgcgacggctcgccacc
atcgtgcgggatgtgccctatgacctgaaccccgaagaactggcggcccgggagccggac
acggcccggctgcacgagctcttttcggagtacggttttttcagcctgatcaaggagctg
accgcccgggccacgctgcagagcgaccgctaccactgcgtgcagacaccggagcaactg
gagcgtctggtcacgagactggaggaggcgcccgcctttgcctttgataccgagaccacc
ggcctggacccccgcaccgcctccctggtggggatatccatcgcccttgaaccccacgaa
gccttctacatcccggtgggacaccgctcacccctccccgcctctccccctcctggggag
ggagatctgttcgcattttccgaacaacggaatgatgacgcagactcctccccccagcgg
ggggaggttgggagggggggaggcctgagtcccggccagctttcccgtgacctggtgctg
gaccgcctgcgtccggtttttggcaacccgtccgtccgcaaggtgggacagaacctgaag
ttcgacctgcaggtgctggacaccgccggtatcgaggtgcaggggagctggtgcgacacc
atgctctgctcctatctcctcaacccgtcgcggggcgggcacggtctggatgccctggcc
caggagcacctgaatcaccggatgatctcctacgacgaggtgaccggcaccggcaggaac
cggatcaacttcagcgaggtggggcttgaggaggcaacccgttacgcctgcgaggatgcc
gacgttacttggcttatacacgaaaagctgttgcccatggtgcgggaggcgggacaggag
gagctgctcttcgggctggaaatgccgctgatggcgattcttacccggatggaacgctac
ggggtgctgctggaccgggaattcctggggcggctctccgaagatttcggcagccagatg
gcccggctggaaacgcaaatccacgaactggcgggtggcccgtttaacctcaattccccc
aagcagttgggggaggtactgttcgagaagctggggctggctacggccaagaagaccaag
gggaaaaccggctggtccacggacaacgaggtgctgaccagcctggcggaagagcatgag
attccccggctgctgctggaataccgggggctggccaagctgaaatccacctacgccgat
gccctggtccgtttggccgacgacagcggccgggtacatacctcctacaaccaggcggtc
acgtccaccggccgcctctcctcctcggaccccaatctgcagaacatcccgatccgcacc
gaagagggccgccgcatccgggaggcgttcattgcgcctgcgggcagcgtcatcctggcg
gccgactactcccaggtggaactgcgggtgctggcccacttgtcctcggacccggtcttc
tgtcaggcattcggcaatgacgaggacatccatacccgcaccgccagcgagattttcggc
ctgttcccggagatggtcaccagcgagatgcggcgccaggccaagaccatcaacttcggg
gtgatctacggtcagggggccttttccctggccaagcagctgggggtggcccggaacgtg
gcggagaagttcattgccgcctacaaggagcgccacagcggtgccatggggttcctggac
cgctgcgtgcagcaggcccgggaacaggggtacgtcaccaccatcctggggcgcaaactg
cccattgccgacatcgccagcgcgaaccacaacctgcgttcctttgcggaacgcaacgcc
atcaactacccgatccaggggtcggcggcggatatcatcaagcaggccatgctgggggtg
gagcgggccattgctgcggagggtctgcagagccgcctgatcatgcaggtgcatgacgag
ctggtcttcgaggtgccggaaggggagctcgcggcaatgaaggtactggttgagcgggag
atgtcgcaggcggtgccgctgcaggtgccgctgaaagtggatatgaactttggaaaaaac
tggagtgaagctcattaa
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