Trichlorobacter ammonificans: GEAMG1_2397
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Entry
GEAMG1_2397 CDS
T09459
Name
(GenBank) Alpha amylase catalytic region
Organism
tamm
Trichlorobacter ammonificans
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Motif
Other DBs
NCBI-ProteinID:
CAH2032233
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Position
GEAMG1:2534620..2538009
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AA seq
1129 aa
AA seq
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MTIPSAMTSYFPLSFPLSAAARHILNLAPFLDDFGRHTYPQIIACRRIAAALSAGSANGE
RPVSAATLLLYGTLLDIWRYLIDEIVAGEQREPLLTALKQCGLPPDDGAVQVTCRTFLHL
FPPRPELVASPRQHLLLRELLLLHISADNRAVDPFRLLQDDRELAATSPYRQVAGHLEQS
LATGPLLPGFGMTLPEVLRAPLRAAPDSLAAQLGFVRDHWGELLPPELLEELLVSFDILE
EERRSRSAGGPGPSPVLSFGKAGSDGAAGGGLAPEHLAGYDQPEYEAFSRDADWMSNVVM
MAKMTHVWLDQLSRSHSYPITRLDQVPDAELDRLASWGFSGLWLIGLWERSPASRRIKEL
CGNPDAHASAYSLFDYTIAADLGGESAFLNLKERAWQRGIRLASDMVPNHTGIYSRWVLE
HPHWFIQSDHCPFPTYQFTGEDLSHEPSVTLQIEDGYWTRRDAAVVFRMIDRRDGRTRYI
YHGNDGTSIPWNDTAQLNYLLAEVREAVIRTILHVARLTPIIRFDAAMTLAKKHYQRLWF
PQRGLGGGIPSRAEHAMGRDEFDAVFPVEFWREVVDRMAVEAPDTLLLAEAFWMMEGYFV
RTLGMHRVYNSAFMNMLKQEENHKYRQTIRNVLEFNPEILKRFVNFMNNPDEKTAVEQFG
SQGKYFGVCVLLATMPGLPMFGHGQIEGFKEKYGMEYRRAYWQEAVDDGLLRGHELWIFP
LLKRRWLFSGSEHFIFYDFVTHDGGVDDNVFAYSNRAGNDRVLVLYHNRFDRTAGWLRDS
VPFSTDTGTGGRELRSTTLAAALGVEQQHDGYLLFRDLARDLEFIRPVAEVREKGLFADL
GDYEFHVFLDFRHRIEEEDGYWGKLCAHLGGRGVASLDEERIQLEYATLITAFEGLLHLL
PSATGTPLPADELSVALGRYQDELLSVADQAETDAIITTLRDACRPALCRKAVRLLRNQG
VTRTQLVLSPRERRLALATSLLRKLFTPPSSDLLHHHGLDRPLAAFITDDPLAERAWGRW
NAALCSATATACSAWSASSLPTTGGRCSAVLATEEVRSFLLVHEDNGILWFNKERFEELF
CRLTLHTAFDAARKLPVPVVPAAKLLDLAAAAGYRLRSLLHLLAGGAAE
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcccttccgccatgacgtcctattttcccctctcctttcccctgtcagcagcg
gcacgacacatcctgaacctagcccctttcctggacgacttcgggcgacatacctatccg
cagatcatcgcctgccgccgtatcgccgccgccctcagcgccggttccgccaacggggaa
cgcccggtatcggcggctaccctgctgctgtacggcaccctgctggacatctggcgctac
ctgatcgacgagattgttgccggagagcagcgggagcccctgctcacggcactgaagcag
tgcggactgccgccggatgatggggcggtgcaggtcacctgccggacctttcttcacctg
tttcctccccgcccggaactcgtcgcaagcccccgtcagcacttgctgctgcgggaactg
ttgctgctgcatatcagcgccgacaatcgcgccgttgatccgttccgcctgctgcaggac
gaccgcgagcttgccgccacctctccctaccgccaggttgccggccatcttgagcaaagc
ctcgccactggcccactcctgcccggtttcggcatgaccctgccggaagtactgcgggcg
ccgctcagagccgcccccgattccctggcagcccaactgggcttcgtccgcgatcactgg
ggtgaactgctgccaccggagctgctggaagagttgctggtatccttcgacatccttgaa
gaagagcggcgaagccggagtgccggtgggccgggaccgagccccgtactcagcttcggc
aaagccgggagtgacggagctgctggtggcgggttagcgccggagcatctggccgggtat
gaccagccggaatatgaggccttttcccgggatgccgactggatgtccaacgtggtgatg
atggccaaaatgacccatgtctggcttgaccagctttcccgcagccacagttacccgatc
acccgcctcgaccaggttcccgatgccgaactggaccggctcgcctcttggggcttcagc
ggtctctggctgatcgggctctgggagcgctcgccggcttcccggcgcatcaaggagctg
tgcggcaatcccgatgcccacgcctcggcctactcgctgttcgattacaccatcgccgca
gacctgggaggggaatcagcctttctcaacctgaaggagcgtgcctggcagcgcggcatc
cggctggccagcgacatggtgcccaaccacaccggcatctactcccgctgggtgctggag
catccccactggttcatccagagcgatcactgtccgtttcccacctaccagttcaccggt
gaagacctctcccacgagccctcggtcaccctccagatcgaggacggctactggaccagg
cgcgatgcagcggtggtcttccggatgatcgaccgtcgggacggccgcacccgctacatc
taccacggcaacgacggcaccagcatcccctggaacgatacggcccagctcaactacctg
ctggccgaggtgcgggaggcggtgatccgtaccattctgcacgtggcgcgcctgaccccg
atcatccgcttcgacgccgccatgaccctggcgaaaaagcattatcagcggctctggttc
ccccagcggggactgggaggcggcatcccgtcccgcgcggaacatgccatgggtcgggac
gagttcgacgccgtctttcccgtggagttctggcgcgaggtggtggaccggatggcggtg
gaagcgccggacaccctgctgctcgctgaggcgttctggatgatggagggctacttcgtc
cgcaccctggggatgcaccgggtctacaactccgccttcatgaacatgctcaagcaggag
gaaaaccacaagtaccgtcagaccatcagaaacgtgctcgagttcaaccccgagatcctc
aagcgcttcgtcaacttcatgaacaaccccgacgaaaagaccgccgtcgagcagttcggc
agccaaggcaagtacttcggcgtctgcgtcctgctggccaccatgccgggactgccgatg
ttcggtcacggccagatcgaggggttcaaggaaaagtacggcatggaataccgtcgggcc
tactggcaggaagcggtggacgacggactgctcagggggcatgaactctggatattcccg
ctgctgaagcgtcgctggctcttttccggttccgaacatttcatcttctacgatttcgtc
acccatgacggcggagtggacgacaacgtcttcgcctacagtaaccgcgccggcaacgac
cgtgttcttgttctgtatcataaccgcttcgaccgcaccgccggttggctgcgcgactcc
gttcccttctccaccgacaccggcacgggcgggcgcgaactgcgctctaccaccctggcg
gctgccctgggagtcgagcagcagcatgacggctacctgctgttccgggaccttgcccgc
gacctggaattcatccggccagttgcggaagtgcgggagaaggggctttttgccgacctt
ggcgactatgaattccacgtcttccttgatttccgccaccgcattgaggaggaggacgga
tactggggcaagctctgcgcccacctcgggggacggggagttgcaagtctcgatgaggag
cgtatccagcttgagtacgctacgctgattaccgcattcgaggggctcctgcacctgctg
cccagcgcaaccggtacgccgctccccgccgatgaactgagcgttgccctcggccgttac
caggatgaactgctctccgttgccgaccaagcggagacggatgccatcatcaccaccctg
cgcgacgcctgcagaccggccctctgccgcaaagccgtgcgcctgctgcggaaccagggg
gttacgcgcacgcagctggtgctgtcgccgcgggaacggcgcctggcgctggccacgtca
ctgctccggaagctgtttaccccccccagcagtgacctgttgcatcaccacggtctggac
aggccgctcgccgctttcatcaccgacgaccccctcgccgaacgggcttggggcagatgg
aatgccgcgctttgcagtgccacggcaacggcatgcagcgcctggtctgcctcgtccctc
cccacgaccgggggccggtgcagcgcggtgctggcgaccgaagaggtacgcagcttcctg
ttggtgcacgaagataacggtattctctggttcaacaaggagcggttcgaagagctgttc
tgccggctgacactgcacaccgccttcgacgccgcccggaagctccccgtacccgtggta
ccggccgcaaaactgctcgatctcgcggcggcggccggttaccgcctgcgcagccttctc
cacctgctggcggggggtgcggcagaatga
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