Trichlorobacter ammonificans: GEAMG1_2826
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Entry
GEAMG1_2826 CDS
T09459
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tamm
Trichlorobacter ammonificans
Pathway
tamm00300
Lysine biosynthesis
tamm00470
D-Amino acid metabolism
tamm01100
Metabolic pathways
tamm01110
Biosynthesis of secondary metabolites
tamm01120
Microbial metabolism in diverse environments
tamm01230
Biosynthesis of amino acids
Module
tamm_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tamm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GEAMG1_2826 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GEAMG1_2826 (dapF)
Enzymes [BR:
tamm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GEAMG1_2826 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
RGM_C
Motif
Other DBs
NCBI-ProteinID:
CAH2032662
UniProt:
A0ABN8HIW1
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All DBs
Position
GEAMG1:complement(3001381..3002217)
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AA seq
278 aa
AA seq
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MKFTKMHGAGNDYVYVNCFEEQVADPAAVAVAVSNRNFGIGSDGLILIMPSDTADVRMRM
FNSDGSESEMCGNGIRCVAKYAYDHGIVSKTEITAETGAGILTLQLFPDSANKIERVRVN
MGPPRLSREEIPMNGPAVPRVVAEELTVLDRTFKITCVSMGNPHCVIYVDDVDNFPVATY
GPLIENHQLFPRRTNVEFIQIISRSEVKQRTWERGAGETLACGTGASAVCVAGVLNNVTD
RKILNHLAGGDLELEWVENGPVFMTGPATEVFSGEIHL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaccaagatgcacggcgcaggcaatgattatgtctatgtgaactgttttgag
gagcaggtggcggacccggcggcggtggccgttgcggtttccaaccggaacttcggcatc
ggttccgacggcctgatcctgatcatgccctcggacacggccgatgtgcggatgcggatg
ttcaacagcgacggttccgagtcggagatgtgcggcaacggtatccgctgcgttgcaaag
tacgcctacgatcatggtatcgtgagcaaaaccgagattaccgccgagaccggcgccggt
atcctgaccctgcagctgttccccgacagcgccaacaagatcgagcgggtgcgggtgaac
atggggccgccgcgactgtcccgcgaagagatcccgatgaacggcccggctgtcccccgg
gtggtggccgaagagttgaccgtgctggaccgcaccttcaagatcacctgcgtctccatg
gggaacccccactgcgtcatctacgtggatgacgtggacaactttccggtggccacttac
ggtccgctgatcgaaaaccaccagctctttccccgccggaccaacgtggagttcatccag
atcatctcccgcagcgaagtgaagcagcgcacctgggagcggggagccggcgagaccctg
gcctgcggtaccggtgccagcgccgtctgcgtggccggcgtgctgaacaacgtcacggac
cggaagatcctcaaccacctggccggcggcgacctggagctggagtgggtggaaaacggg
ccggtgttcatgaccggaccggcaacggaagtgttcagcggcgagattcacctgtag
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