KEGG   Trichlorobacter ammonificans: GEAMG1_2826
Entry
GEAMG1_2826       CDS       T09459                                 
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
tamm  Trichlorobacter ammonificans
Pathway
tamm00300  Lysine biosynthesis
tamm00470  D-Amino acid metabolism
tamm01100  Metabolic pathways
tamm01110  Biosynthesis of secondary metabolites
tamm01120  Microbial metabolism in diverse environments
tamm01230  Biosynthesis of amino acids
Module
tamm_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:tamm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GEAMG1_2826 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    GEAMG1_2826 (dapF)
Enzymes [BR:tamm01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     GEAMG1_2826 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF Pro_racemase RGM_C
Other DBs
NCBI-ProteinID: CAH2032662
UniProt: A0ABN8HIW1
LinkDB
Position
GEAMG1:complement(3001381..3002217)
AA seq 278 aa
MKFTKMHGAGNDYVYVNCFEEQVADPAAVAVAVSNRNFGIGSDGLILIMPSDTADVRMRM
FNSDGSESEMCGNGIRCVAKYAYDHGIVSKTEITAETGAGILTLQLFPDSANKIERVRVN
MGPPRLSREEIPMNGPAVPRVVAEELTVLDRTFKITCVSMGNPHCVIYVDDVDNFPVATY
GPLIENHQLFPRRTNVEFIQIISRSEVKQRTWERGAGETLACGTGASAVCVAGVLNNVTD
RKILNHLAGGDLELEWVENGPVFMTGPATEVFSGEIHL
NT seq 837 nt   +upstreamnt  +downstreamnt
atgaaattcaccaagatgcacggcgcaggcaatgattatgtctatgtgaactgttttgag
gagcaggtggcggacccggcggcggtggccgttgcggtttccaaccggaacttcggcatc
ggttccgacggcctgatcctgatcatgccctcggacacggccgatgtgcggatgcggatg
ttcaacagcgacggttccgagtcggagatgtgcggcaacggtatccgctgcgttgcaaag
tacgcctacgatcatggtatcgtgagcaaaaccgagattaccgccgagaccggcgccggt
atcctgaccctgcagctgttccccgacagcgccaacaagatcgagcgggtgcgggtgaac
atggggccgccgcgactgtcccgcgaagagatcccgatgaacggcccggctgtcccccgg
gtggtggccgaagagttgaccgtgctggaccgcaccttcaagatcacctgcgtctccatg
gggaacccccactgcgtcatctacgtggatgacgtggacaactttccggtggccacttac
ggtccgctgatcgaaaaccaccagctctttccccgccggaccaacgtggagttcatccag
atcatctcccgcagcgaagtgaagcagcgcacctgggagcggggagccggcgagaccctg
gcctgcggtaccggtgccagcgccgtctgcgtggccggcgtgctgaacaacgtcacggac
cggaagatcctcaaccacctggccggcggcgacctggagctggagtgggtggaaaacggg
ccggtgttcatgaccggaccggcaacggaagtgttcagcggcgagattcacctgtag

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