Tahibacter amnicola: N4264_05555
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Entry
N4264_05555 CDS
T09840
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
tamn
Tahibacter amnicola
Brite
KEGG Orthology (KO) [BR:
tamn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tamn03021
]
N4264_05555 (rpoH)
Transcription machinery [BR:
tamn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
N4264_05555 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
KORA
HTH_3
HTH_10
GntR
UCR_14kD
Phage_terminase
HTH_15
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
UXI69117
LinkDB
All DBs
Position
1334343..1335209
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AA seq
288 aa
AA seq
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MSEALALVSNNLPIPSALGSLDAYISAVHRVPMLTQDEEQDLAERLRYENDLAAAKRLVL
SHLRFVVHVARGYQGYGLPLGDLVQEGNIGLMKAVKRFDPTLGVRLVSFAVHWIRAEMHE
FILRNWRIVKVATTKAQRKLFFNLRKSKKRLGWMNHEEVQSVAKELGVPVATVLEMESRL
AGRDVGFDAPQDSDEDTPPAPVAYLVDHRADPYESLANQDQEDNQLEVLTEGLARLDARS
RDIIARRWLKDGEKATLQELADEYGVSAERIRQIEANAMKKIRALFVA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagcccttgcccttgtcagcaacaacctgccgattccgagtgcccttggaagt
ctcgacgcgtacatcagcgccgtgcaccgggtaccgatgctgacccaggacgaggaacag
gacctggccgaacggctgcgctatgagaatgatctcgcggccgccaaacggctggtgctg
tcgcacctgcgcttcgtggtccacgtggcgcgcggctaccagggatacggccttcccctg
ggagacctcgtccaggaaggcaatatcggcctgatgaaggcggtcaagcgcttcgacccg
accctgggcgtgcgcctggtctccttcgcggtccactggatccgcgccgagatgcacgag
ttcatcctgcgcaactggcgcatcgtcaaggtcgccacgaccaaggcgcagcgcaagctg
ttcttcaacctgcgcaagtcgaaaaagcgcctgggctggatgaaccacgaggaagtccag
agcgtggccaaggaactgggcgtgccggtggcgacggtgcttgagatggaatcccgcctg
gccggccgcgacgtcggcttcgacgcaccgcaggattcggacgaagacaccccgccggcc
ccggttgcctacctcgtcgaccatcgcgccgacccgtacgagtcgctggccaaccaggac
caggaagataaccagctcgaagtgctgaccgaaggtctggcccgcctggatgcccgctcc
cgcgacatcatcgcgcgccgctggctcaaggacggcgaaaaggccacgctgcaggaacta
gccgacgaatacggcgtatccgcggagcgtatccgccagatcgaagccaatgcgatgaag
aagattcgcgcgctgttcgttgcctga
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