Tahibacter amnicola: N4264_05565
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Entry
N4264_05565 CDS
T09840
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
tamn
Tahibacter amnicola
Pathway
tamn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tamn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
N4264_05565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tamn03400
]
N4264_05565
Enzymes [BR:
tamn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N4264_05565
DNA repair and recombination proteins [BR:
tamn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
N4264_05565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
UXI70634
LinkDB
All DBs
Position
complement(1336640..1338832)
Genome browser
AA seq
730 aa
AA seq
DB search
MPILKVAVPVPLPQVFDYRAPRGTGVRPGCRVEVPFGRDRRVGVVVGHASESDVPPGKLK
PVTAVLDETPLVNGEWLATLQWASRYYQCALGIALETALPVGLRQAKPLPFEGYRALALS
AHGRQMVSDPPLRRGSRVRSLFERLAEGPVTYAALDTDLPGWRDSATALRHRGFIETVSL
SASAPVGARVPGPPLNPHQTEAIGAVTASFGRFQPWLLEGVTGSGKTEVYLGLVEAALAR
DRQALVLVPEIGLTPQTLRRFRDRFGPAVHALHSGLAEGERSRAWLAAARGDAKVILGTR
SAIFAPLPALGLIAVDEEHDASYKQQDGFRYSARDLALVRARALSIPVVLGSATASLESL
ANAESGRYARLTLPQRAGAAKPPTLHIVDQRRARLVHGLAPELVSAIKACVQRGEQALIF
RNRRGYAPVLLCHDCGWHADCERCNKPMTFHRGRGRLVCHHCEAERRVPVQCPECHGPAL
QPQGQGTERLEESLGELFPGVPVIRVDRETTRNRGAMEALLDRLGPHQSGIYVGTQMLAK
GHDLPNLTLVAILGVDEGLHSVDFRASERLGQLVVQVSGRAGRAHKPGAVYLQTHHPDHA
LLAKLLRGGYRALAESLLAERRAAELPPFAHLALLRAEAKDGERSLAFLNDAAAAARETE
PGSLDGIEFMGPFPAPMPLRAGLHRFQLIASSTDRARLQACLPRWLDRIRALPSARQARW
SLDVDPIDLY
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
ctgcccatcctcaaggtggccgtccccgttcccctgccccaggtgttcgactaccgcgcg
ccgcggggtaccggcgtgcgccctgggtgccgcgtcgaagtgccgttcgggcgtgaccgc
cgcgtgggcgtggttgtcggccacgccagcgaaagcgatgttccaccgggaaaactcaag
ccggtgaccgcggtgctcgacgaaacgccgctggtcaatggcgaatggctggccaccctg
caatgggcatcgcgctattaccaatgcgccctgggcatcgcgctggagactgccctgccg
gtcggcctgcgccaggccaagcccctgcccttcgagggctatcgcgcgctggcgctgagc
gcgcatggccgccagatggtgtccgacccgccgttgcgccgcggcagccgcgtgcgcagc
ctgttcgagcgcctggccgagggcccggtgacctatgctgccctcgataccgacttgccc
ggctggcgcgacagcgcaaccgcgctgcgccatcgcggatttatcgaaacggtatccctg
tctgccagtgcaccggtcggcgcgcgcgtgccggggccaccgctcaatccccatcagacc
gaagccatcggcgcggtcacggccagtttcggccggttccagccctggctgctggaaggt
gtgaccggcagcggcaagacggaggtttacctggggctggtcgaagccgcgctcgcgcgc
gatcgccaggccctggtgctggtgcccgaaatcggcctgacgccccagaccctgcgccga
ttccgcgaccgcttcggtcccgctgttcacgccctgcactcgggcctggccgaaggcgaa
cgatcgcgcgcatggctggcggcggcgcgcggggatgcgaaagtcatcctgggaacgcgc
tcggccatcttcgctcccttgccggcgctggggctgatcgcggtcgatgaagagcacgat
gcgtcctacaagcagcaggacggcttccgttacagcgcccgtgacctggcactcgtacgg
gcgcgggcgctgtcgatccccgtcgttctgggttcggccacggcgtcgctggaaagcctg
gccaacgccgaatccggccgttacgcacggttgaccctgccgcaacgcgccggcgccgcg
aagccaccgaccttgcacatcgtcgaccagcgccgcgcccggctcgtgcacgggctggca
ccggagctggtgagtgccatcaaggcctgcgtacagcgcggcgagcaggccctcatcttc
cgcaaccggcgcggctatgcgccggtcttgctctgccacgactgtggctggcacgccgac
tgcgagcgttgcaacaaaccgatgacgtttcaccgcgggcgcgggcgcctcgtctgccac
cattgcgaggcggagcggcgtgttccggtgcaatgccccgaatgccacgggccggcgctg
caaccgcagggccagggcaccgaacggctggaggaatccctcggcgagctgtttcccggc
gtcccggtgatccgcgtggaccgcgagaccacgcgtaaccgcggtgccatggaggcattg
ctggaccggctggggccgcaccagtcgggtatctatgtcggcacgcagatgctggccaag
gggcacgacctgcccaacctgaccctggtggccatcctcggcgtggacgaggggctgcac
agtgtggatttccgcgcttcggagcggctcggccagctggtggtgcaggtcagcggccgc
gccggccgggcgcacaagcctggcgcggtgtatctgcaaacgcaccatcccgaccacgcc
ctgctggcgaaactgctgcggggcggttatcgcgcgctggccgaaagcctgctggccgag
cgccgcgccgctgaactgcccccctttgcacacctggcgctgctgcgcgccgaagccaag
gacggcgagcgcagcctggccttcctcaacgacgccgccgcggcagcccgggaaacggaa
ccgggcagcctcgacggcattgaattcatgggtcccttcccggcgccgatgcccctgcgc
gccggacttcatcgcttccagctcattgcctcgtcgaccgatcgcgcgcgcctgcaggcc
tgcctgccgcgctggctggaccggatccgggcgctgccctcggcgcgccaggcgcgctgg
tcactggacgtggacccgatcgatctctactga
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