Tahibacter amnicola: N4264_07360
Help
Entry
N4264_07360 CDS
T09840
Name
(GenBank) STM4012 family radical SAM protein
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
tamn
Tahibacter amnicola
Pathway
tamn00860
Porphyrin metabolism
tamn01100
Metabolic pathways
tamn01110
Biosynthesis of secondary metabolites
tamn01240
Biosynthesis of cofactors
Module
tamn_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
tamn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
N4264_07360
Enzymes [BR:
tamn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
N4264_07360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
UXI69458
LinkDB
All DBs
Position
1768310..1769635
Genome browser
AA seq
441 aa
AA seq
DB search
MTDLLERLAASPFEAYAYSYPHKTAYRALAEAVPLAGAWQAEDRSRLFAYFHIPFCTYRC
GFCNLFAIGQPGDDLVDRYLDQMQRQMTIVAGQLGDHRIAQVVLGGGTPSYLTAAQLATL
FEVIGRRFTVDLGKAPVGMEVSPETATHDRLSVCRSAGVDRISMGVQSFSESELSALVRP
ASVRAVLDAVDVIRRLDFPTLNLDLIYGIPGQTPASFVQSLRQLLALQPEEIYLYPLYVR
PQTGMDRLARQPADAARRQLYEVGRDHLLASGYHQVSMRLFRTTPLTAAPATAYRCQDDG
MVGIGCGARSYTRALHYSDDYAVARSGIHAILRRYVELAPEAFAQARHGFVLNDEEQRRR
YLIQSLLTWPGLGIADYATRFGETPQHDFPEIDALQAAGLARADAAHIALTPEGMAYADA
IGPWLNSAPVQQRMAEYAHAV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgactgacctgcttgaacgcctggcggcgtcgccgttcgaggcctacgcctattcgtat
ccgcacaagaccgcgtaccgggcgctggcagaagcggtgcccctggcaggcgcgtggcag
gctgaggatcgctcccggctttttgcctatttccacattcccttctgcacctaccgctgt
ggcttctgcaacctgttcgccattggccagcccggtgatgacctggtggatcgctatctc
gaccagatgcagcggcagatgaccatcgttgccggacagctgggcgatcaccgcattgcg
caggtggtactgggcggtggaacgcccagctatctgacggccgcccagctggcgacgctt
ttcgaggtcatcggccggcgcttcacggtggaccttggaaaggcacccgtcggcatggag
gtcagtccggaaacggcgacccatgaccgtctttccgtgtgccgctcggcgggcgtcgac
cggatcagcatgggcgtgcagagtttcagcgagtccgagctgtcagccctggtgcggccg
gcgtcggtgcgggccgtgctggatgccgtcgacgtgatccgccggctggatttccccacg
ctcaatctcgatctgatctatggcattcccggccagacgcctgcctcgttcgtgcagtcg
ctgcgccagctgctcgcgctgcagccggaggagatctacctctacccgttgtacgtgcgg
ccgcagaccggaatggatcgcctggcccgccagcccgccgacgccgcgcgacggcagttg
tacgaggtcggccgcgatcaccttctggcctccggctatcaccaggtgtcaatgcggttg
ttccgcacgacgccgctcacggccgccccggcgacggcctaccgttgccaggatgacggc
atggtcggcatcggctgcggcgcgcggtcctatacccgcgcgctgcactattccgacgac
tacgccgtggcgcgttcgggcatccatgcgattctgcgccgttacgtcgaactggcgccg
gaagcattcgcacaggcgcggcacggttttgtgctcaatgacgaggagcagcgccgccgt
tatctgatccagtcgctgctgacctggccgggactgggcatcgcggattacgcgacgcgg
ttcggggaaacgccgcagcacgactttcccgagatcgacgccctgcaggcggcggggctc
gcgcgagccgatgccgcgcatatcgcgctgacgccggagggcatggcgtatgcggatgcg
atcgggccctggctcaattccgcgccggtgcagcagcgcatggccgagtacgcgcatgcg
gtctga
DBGET
integrated database retrieval system
