Tahibacter amnicola: N4264_08140
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Entry
N4264_08140 CDS
T09840
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
tamn
Tahibacter amnicola
Pathway
tamn02024
Quorum sensing
tamn03060
Protein export
tamn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tamn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
N4264_08140 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
N4264_08140 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N4264_08140 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tamn02044
]
N4264_08140 (ffh)
Enzymes [BR:
tamn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
N4264_08140 (ffh)
Secretion system [BR:
tamn02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
N4264_08140 (ffh)
Eukaryotic Sec-SRP protein
N4264_08140 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
cobW
AAA_16
AAA_26
APS_kinase
AAA_31
AAA_30
AAA_33
ParA
6PF2K
T2SSE
NACHT
ABC_tran
AAA_14
KTI12
AAA_19
ResIII
YqeC
Thymidylate_kin
Fer4_NifH
TsaE
AAA_28
ATP_bind_1
NPHP3_N
ArsA_ATPase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UXI69600
LinkDB
All DBs
Position
1942315..1943703
Genome browser
AA seq
462 aa
AA seq
DB search
MFESLSQRLSATIERLRGRARLTEENIRESLREVRIALLEADVALPVVQALIERVKVRAV
GQDVLKSLTPGQALVRVVRDELTSVMGTVNSDLNLATQPPAVVLMAGLQGAGKTTTTAKL
ARFLKERKKKKVMVVSCDVYRPAAIEQLRVLAEQVEVLFHPSAGDQDPVAIARAALDAAR
KNFADVLLVDTAGRLHVDQDMMVEIKALHAALNPIETLFVVDSMTGQDAANTAKAFAEAL
PLSGVILTKTDGDARGGAALSVRYITGRPIKFIGAGEKTEALDPFHPDRIAQRILGMGDV
LSLVEQVEQKVDQEKAQKLAEKVMKGKRFDLNDMRDQLQQMLSMGGLGSLMEKLPGVNSL
PENVKSKVNDREVHRMIAIINSMTKKERRHPDLLNGSRKARVARGSGTLPADVNKLLKQY
QQMEKMMSKLAGGGLKGLMRSMSGAMRGMGGGGFPGGGGMMR
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagtccctgagccagcggctgtctgccaccattgagcgtctgcgcggtcgtgcg
cgcctgaccgaagaaaacatccgggagtcgctgcgcgaagtccgcattgcgctgctggag
gccgacgtggccctgccggtggtgcaggcgctgatcgaacgcgtcaaggtacgcgccgtc
ggccaggatgtgctcaagagcctcactccgggccaggccctggtccgcgtggtgcgtgac
gagctcacctcggtcatgggaacggtcaacagcgacctcaacctggcgacgcagccgccg
gccgtggtcctgatggctggcctgcagggcgccggcaagaccaccacgaccgccaagctg
gcccgcttcctcaaggagcggaagaaaaagaaggtcatggtcgtcagctgtgacgtctac
cgtccagccgctatcgagcaattgcgggtgctggccgagcaggtcgaggtgctgtttcat
cccagcgccggcgaccaggatcccgtcgccatcgcgcgcgccgccctggacgcggcccga
aagaatttcgccgacgtgctgttggtcgataccgccggccgcctgcatgtcgatcaggac
atgatggtcgagatcaaggcgctgcacgcggccctgaacccgatcgaaaccctgttcgtg
gtcgattcgatgaccggccaggacgccgccaatacggccaaggccttcgccgaggcgctg
ccgctgagtggcgtgatcctcaccaagacggacggcgacgcccgtggcggcgcggcgctg
tcggtgcgctacatcactggccggccgatcaagttcatcggcgccggtgagaagaccgag
gcgctggacccgttccaccccgaccgcatcgcccagcgcatcctgggcatgggcgacgtg
ctgtcgctggtcgagcaggtcgagcagaaggtcgaccaggaaaaggcccagaagctggcc
gaaaaggtcatgaagggcaagcgtttcgacctcaatgacatgcgcgaccagctgcagcag
atgctgagcatgggcggactggggtccttgatggagaaattgccgggcgtgaacagtttg
ccggagaacgtcaaatccaaggtcaacgatcgcgaagtgcaccgcatgatcgcgatcatc
aattcgatgaccaagaaggagcgccgtcatccggatctcctgaatggttcgcgcaaggca
cgcgtggcgcgcggttcgggtacgttgcccgccgacgtgaacaagttgctcaagcagtac
cagcagatggaaaagatgatgtccaagctcgcgggcggcggcctcaagggcctgatgcgc
tccatgtccggcgccatgcgtggcatgggcggcggcggctttccgggcggcggcgggatg
atgcgctga
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