Tahibacter amnicola: N4264_08260
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Entry
N4264_08260 CDS
T09840
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
tamn
Tahibacter amnicola
Brite
KEGG Orthology (KO) [BR:
tamn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tamn03032
]
N4264_08260
03036 Chromosome and associated proteins [BR:
tamn03036
]
N4264_08260
03400 DNA repair and recombination proteins [BR:
tamn03400
]
N4264_08260
DNA replication proteins [BR:
tamn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
N4264_08260
Chromosome and associated proteins [BR:
tamn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
N4264_08260
DNA repair and recombination proteins [BR:
tamn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
N4264_08260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Phage_cement_2
NA37
Motif
Other DBs
NCBI-ProteinID:
UXI69616
LinkDB
All DBs
Position
1964740..1965012
Genome browser
AA seq
90 aa
AA seq
DB search
MNKAEFVGAVADAAELTKADAARAVDAVVEVVKKALKKGDTVALVGFGTFSVRKRAARTG
RNPQTGQTIKIKASKNPAFKAGKALKDALN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcagaattcgtgggcgcggtcgccgacgccgcggaactaacgaaagccgac
gccgcgcgggctgtcgatgcggtggtcgaagtcgtcaaaaaggcgttgaagaaaggcgac
acggtcgctctcgtcgggttcggcactttttccgtgcgcaagcgtgccgcacgtaccggc
cgcaatccgcagacgggccagacgatcaagatcaaggcatcgaagaatccggctttcaaa
gctggcaaagcgctcaaggatgccctaaactaa
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