Tahibacter amnicola: N4264_08970
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Entry
N4264_08970 CDS
T09840
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tamn
Tahibacter amnicola
Brite
KEGG Orthology (KO) [BR:
tamn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tamn03016
]
N4264_08970 (truB)
Enzymes [BR:
tamn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
N4264_08970 (truB)
Transfer RNA biogenesis [BR:
tamn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
N4264_08970 (truB)
Prokaryotic type
N4264_08970 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
UXI69745
LinkDB
All DBs
Position
2109565..2110488
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AA seq
307 aa
AA seq
DB search
MSKKPDPTAWRDVHGIVLLDKPKGLSSNQALQKVRRLYAAAKGGHTGSLDPMATGLLPIC
LGEATKIAGYLLGSGKAYVATVELGTTTVTGDAEGEIDQVRPVPTLTAADVEQALAPLRG
RIWQTPPVYSALKQGGVPLYRLARQGETVVVAPRQVEVHRLEVLSQTPLQLTLLVECGSG
TYIRSLAVDLGGALGCGAHLSALRRTWVDPFRVPQMFTVDALEATLATQGRAALDRLILP
TDQGLAGMPLVTLDADQARRLQMGQPVRVGALAPGLCRVHDAAGHLIALGEVEAGDLKVR
RGLNLPV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaaacccgacccgacggcctggcgcgacgtgcacggcattgtcctgctcgac
aagcccaaaggcctcagctcgaaccaggccctgcagaaagttcgccgcctgtatgcggcc
gccaagggcggacataccggttcgctcgatccgatggcgaccggcctgttgccgatctgc
ctgggtgaggcgaccaagatcgccggttacctgctcggatcgggcaaggcctacgtcgcg
accgtcgaactgggcaccaccaccgtcaccggcgatgccgaaggcgagatcgaccaggta
cgccccgtgccgacgctcactgccgcggatgttgagcaggctttggcaccgttgcgcggc
cgcatctggcagacacctccggtctattcggcgctcaagcagggcggtgttccgctctac
cgccttgcgcggcagggcgaaacggtcgtcgtcgcgccgcggcaggtcgaggtgcaccgg
ctggaagtcctctcgcagaccccgttgcagctgaccctcctggttgaatgcggctccggc
acctatatccgcagcctggcggtggacctgggcggggccctggggtgcggcgcgcacctg
tcggcattgcgccgcacctgggtcgaccctttccgcgtgccgcagatgttcacagtggac
gccctcgaggcgaccctcgcgacgcaagggcgcgctgcccttgaccggctgatactgccg
acggatcagggtttggccggcatgccgctggtcacgctcgacgccgaccaggcgcggcgc
ctgcagatggggcagccggtccgcgtgggagcgctggcaccggggctgtgccgggtgcac
gatgcggccggtcacctgatcgccctgggcgaggtggaagccggtgacctgaaggtccgg
cgcggcctcaacctgccggtgtga
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