Tahibacter amnicola: N4264_09105
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Entry
N4264_09105 CDS
T09840
Name
(GenBank) hypothetical protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
tamn
Tahibacter amnicola
Pathway
tamn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tamn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N4264_09105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tamn03000
]
N4264_09105
03400 DNA repair and recombination proteins [BR:
tamn03400
]
N4264_09105
Enzymes [BR:
tamn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
N4264_09105
Transcription factors [BR:
tamn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
N4264_09105
DNA repair and recombination proteins [BR:
tamn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
N4264_09105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
DUF3323
Motif
Other DBs
NCBI-ProteinID:
UXI69770
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Position
2140433..2141386
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AA seq
317 aa
AA seq
DB search
MKECVRCRAWGSADRGILWIPLEGPGCVYRCWLGLPVLLLALQWRCDALSSKKPQALTGV
VHVDASVYHRSIAIGAARGCVSVRPGDGNALEATIRVSDFSHLSAIVARPRRVFDLAADP
LAIGEHLKGDSLLAGLVTARPGIRVAGPWDGFERAVRTVLCWQCTDSSAQTGAALVAALG
EPCRDSGAAGITRQFPDPAQVSASPLDRLGISVAQRRAIAAIARMAVVDPHAFDAGDSLE
EGVQRLTERAGVDEPLAHEIALRLWRETDVFAHQDEAVLRAVAGCIASVGELIERAEAWR
PWRAYAANQLRAAMPSR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaatgtgtgcggtgtcgggcatggggcagcgcggataggggcatcctatggatt
ccccttgagggcccaggatgtgtctatcgatgttggctcgggctgccagtactgctattg
gcgcttcagtggcggtgtgacgctctgtccagcaaaaagccgcaggcactgacgggtgtg
gtacatgtcgatgcgtcggtgtatcaccgcagcattgccatcggcgcggcgcggggctgt
gtgtcggttcggccgggtgatgggaacgcgctggaggccaccattcgcgtttctgatttc
tcccacttgtcagccattgtggcgcgaccgcgccgcgtgttcgatctggcggcggatccc
ctggcgattggtgaacatctgaagggcgacagcttgctcgcagggcttgtgacagcacgc
ccgggtattcgagtggccggcccatgggatggcttcgagcgcgcggtgcgtaccgtgctt
tgctggcagtgcactgatagcagcgcacaaaccggcgccgcgctggtcgccgcgctcggc
gagccttgccgtgacagtggcgctgctggcatcacgcggcagtttcccgatcctgcgcag
gtgtccgcatcaccgctggatagactcgggatttctgtcgcacagcggcgtgccatcgcg
gcgattgctcgcatggcggttgtcgatccgcatgcattcgatgcgggcgacagccttgag
gagggtgtgcagcgccttaccgagcgcgctggcgttgatgaaccccttgcgcacgagatc
gccctgcggctctggcgtgagaccgatgtgtttgcgcaccaggacgaggccgtgttgcgg
gcagtagcaggatgcattgcctcggttggtgagttgatcgaacgggcagaggcatggcgt
ccgtggcgagcgtatgcggccaatcagctgcgcgcagcgatgcctagccggtga
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