Tahibacter amnicola: N4264_10390
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Entry
N4264_10390 CDS
T09840
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tamn
Tahibacter amnicola
Pathway
tamn00061
Fatty acid biosynthesis
tamn00071
Fatty acid degradation
tamn01100
Metabolic pathways
tamn01212
Fatty acid metabolism
tamn02024
Quorum sensing
tamn04146
Peroxisome
Module
tamn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tamn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
N4264_10390
00071 Fatty acid degradation
N4264_10390
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
N4264_10390
09145 Cellular community - prokaryotes
02024 Quorum sensing
N4264_10390
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tamn01004
]
N4264_10390
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tamn04147
]
N4264_10390
Enzymes [BR:
tamn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
N4264_10390
Lipid biosynthesis proteins [BR:
tamn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
N4264_10390
Exosome [BR:
tamn04147
]
Exosomal proteins
Exosomal proteins of breast milk
N4264_10390
Exosomal proteins of breast cancer cells
N4264_10390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4235
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UXI70009
UniProt:
A0ABY6BJ21
LinkDB
All DBs
Position
complement(2435182..2436864)
Genome browser
AA seq
560 aa
AA seq
DB search
MSTQRPWLASYPSGVPAEIDLDEYSSVVAVLESACERFRHRPAFSNMGKVLTYGDVDRLS
RTFAAFLTGELGLKKGDRVALMLPNVLQYPIAIFGVLRAGLVVVNTNPMYTARELKHQLN
DSGASAIVVLDNFAGTVAEVIRETSCKHVITTGLGDLLGFPKSILTNFVVKYVKKLVPAY
RIDGAIRFRDALSRGERHSYKTAGLTHDDIAFLQYTGGTTGVAKGAMLTHRNLIANMQQA
SAWLGVNARLGEEVIITALPLYHIFALTANGLVFMKFGGLNYLITNPRDMPGFVKEMSGV
KFTAITGVNTLFNGLLNTPGFDKLDFSSLHLTLGGGMAVQRAVAERWKKVTGITLIEAYG
LTESSPAACINPMDLPDYNGSIGLPIPSTEVSVQDDNGNHLPMGEVGELCLRGPQVMKGY
WNRPEETAKVLSADGWLHTGDVARIDDKGYVYIVDRKKDMILVSGFNVYPNEVEDVVATH
PGVLEVAAIGVPDDKSGEAVKIVVVRKDPNLSADDLRAHCKANLTGYKLPRYIEFRDSLP
KSNVGKILRRELRDAPKTAA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccaacgcccctggctcgcgagctatccttccggcgttccggccgaaattgat
ctcgacgagtacagttccgtcgtggcggtgctggagtcggcctgtgagcgcttccgccac
cggccggcgttctccaatatgggcaaagtgctcacctatggtgacgtcgaccgtctcagc
cgcaccttcgccgcattcctgaccggcgaattgggtctgaagaaaggcgaccgcgtcgcg
ctgatgctgcccaatgtgttgcagtatcccatcgccatcttcggtgtgctgcgtgcgggt
ctggtggtggtcaacaccaaccccatgtacacggcgcgcgaactcaagcaccagctcaat
gactccggcgcatcagccatcgtcgtcctcgacaacttcgccggcactgtcgccgaggtg
atccgggaaacgtcctgcaagcacgtgatcaccaccggtctgggcgacctcctcggtttc
cccaaatccattctcacgaatttcgtcgtcaagtacgtcaagaagctggtgccggcctat
cgtatcgacggcgcgatccgcttccgcgacgccctgtcccgcggcgagcggcattcgtac
aagactgccggactgacccacgacgacattgccttcctccagtacaccggcggtacgaca
ggcgttgccaaaggtgcgatgctcacccaccgcaatctcatcgcgaacatgcagcaggca
tcagcctggctcggcgtgaatgcgcgcctgggcgaggaagtcatcattaccgcgctgccg
ctctaccatatcttcgcgctgacggcgaacggactcgtcttcatgaagttcggcggcctg
aactacctcatcaccaacccgcgtgacatgccggggttcgtcaaggaaatgtctggcgtc
aaattcacggccatcacaggcgtaaatacgctcttcaacggcctgctgaacaccccggga
ttcgacaagctcgacttctccagcctgcacctcacgcttggcggcggcatggcggtgcag
cgtgcggtggccgagcgctggaagaaggtcaccggcatcaccctgatcgaggcctacggc
ttgaccgagtcctcacccgccgcctgcatcaaccccatggacctgcccgactacaacggc
tcgatcggccttccgatcccgtccaccgaagtcagcgtccaggatgacaacggtaaccac
ctgccgatgggcgaagtgggcgaactgtgcctgcgcggaccgcaggtcatgaagggctac
tggaaccgtccggaagagacggcgaaggtcctcagcgccgacgggtggctccacaccggc
gacgtggcgcgcatcgacgacaagggttacgtctacatcgtcgatcgcaagaaggacatg
atcctcgtgtcgggattcaatgtgtatccgaatgaagtcgaggatgtcgtcgccacccat
ccgggcgtactcgaggtggccgcgatcggcgttccggacgacaagtccggcgaggcggtg
aagatcgtggtcgtccgcaaggatccaaacctcagcgccgacgacctgcgcgcgcactgc
aaggcgaacctcaccggctacaagctgccgcgctacatcgagtttcgtgactccctgccc
aagagcaatgtcggcaagatcctgcgccgcgagctgcgcgacgcaccaaaaaccgccgca
taa
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