Tahibacter amnicola: N4264_12405
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Entry
N4264_12405 CDS
T09840
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
tamn
Tahibacter amnicola
Pathway
tamn00010
Glycolysis / Gluconeogenesis
tamn00020
Citrate cycle (TCA cycle)
tamn00260
Glycine, serine and threonine metabolism
tamn00280
Valine, leucine and isoleucine degradation
tamn00310
Lysine degradation
tamn00380
Tryptophan metabolism
tamn00620
Pyruvate metabolism
tamn00630
Glyoxylate and dicarboxylate metabolism
tamn00640
Propanoate metabolism
tamn00670
One carbon pool by folate
tamn00785
Lipoic acid metabolism
tamn01100
Metabolic pathways
tamn01110
Biosynthesis of secondary metabolites
tamn01120
Microbial metabolism in diverse environments
tamn01200
Carbon metabolism
tamn01210
2-Oxocarboxylic acid metabolism
tamn01240
Biosynthesis of cofactors
Module
tamn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
tamn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
tamn_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
tamn_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
tamn_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
tamn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
N4264_12405 (lpdA)
00020 Citrate cycle (TCA cycle)
N4264_12405 (lpdA)
00620 Pyruvate metabolism
N4264_12405 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
N4264_12405 (lpdA)
00640 Propanoate metabolism
N4264_12405 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
N4264_12405 (lpdA)
00280 Valine, leucine and isoleucine degradation
N4264_12405 (lpdA)
00310 Lysine degradation
N4264_12405 (lpdA)
00380 Tryptophan metabolism
N4264_12405 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
N4264_12405 (lpdA)
00670 One carbon pool by folate
N4264_12405 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tamn04147
]
N4264_12405 (lpdA)
Enzymes [BR:
tamn01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
N4264_12405 (lpdA)
Exosome [BR:
tamn04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
N4264_12405 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
AlaDh_PNT_C
HI0933_like
GIDA
FAD_binding_2
FAD_oxidored
Pyr_redox_3
3HCDH_N
FAD_binding_3
Thi4
Lycopene_cycl
NAD_binding_8
2-Hacid_dh_C
DAO
Lys_Orn_oxgnase
TSP_Ig-like
Motif
Other DBs
NCBI-ProteinID:
UXI70397
LinkDB
All DBs
Position
complement(2940946..2942370)
Genome browser
AA seq
474 aa
AA seq
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MSQHFDVVVIGAGPAGYVAAIRAAQLGLKTACVDAYVGKDGKPALGGTCLNVGCIPSKAL
LDSSKQFHNLTHNFAVHGISASNPTIDVGAMIGRKDKIVKQFTGGITMLFKSNKVTPVAG
FATLKPGRVVSVKAADGSVSELTATNVIIAAGSVPIELPFAKFDNKNIVDNAGALDFAST
PKRLGVIGAGVIGLELGSVWKRLGAEVTIIEALPDFLAAADQDIAKAAAREFKKQGLDIR
LGAKLSKAEVKGDEVHLAYTDAKGEQSLVVDKLLVAVGRRAGTQGLLAEGTGVQLDERGR
VVVDDHCWTGVEGVWAIGDCVRGPMLAHKGSEEGIAVAELIAGKAGHVNLDTVPWVIYTE
PEVAWVGKTEEQCKAEGIPYKTGSFPFAAVGRAVAMNETAGMVKVIAHAETDRLLGVHMV
GACVSEMVHEAVVAMEFKGSAEDLARICHAHPTLSEAVHEAALAVDKRAIHKAN
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacattttgatgtcgttgtgatcggcgccggccccgccggatacgtggccgcg
atccgcgccgcccagctcggcctgaagacggcctgcgtcgacgcctacgtcggcaaggat
ggcaagccggcgcttggcggcacctgcctcaacgtaggttgcattccgtccaaggcgctg
ctcgattcgtccaagcagttccacaacctgacgcacaacttcgccgtgcacggcatcagc
gcgtcgaacccgaccatcgacgtcggcgccatgattggccgcaaagacaagatcgtgaag
cagttcaccggcggcatcaccatgctgttcaagtcgaacaaggtcacgccggttgccggc
tttgccacgctcaagccgggtcgcgtcgtctcggtgaaggcggcagatggcagcgtcagc
gagctgaccgccaccaacgtcatcatcgccgcgggctccgtgccgatcgagctgccgttc
gcgaagttcgacaacaagaacatcgtcgataacgccggcgcactcgacttcgccagcacg
cccaagcgcctgggcgtcatcggtgcgggcgtgatcggcctggaactgggcagcgtgtgg
aagcgcctgggtgccgaagtcaccatcatcgaagcgctgccggatttcctcgccgccgcc
gaccaggatatcgccaaggccgccgcgcgcgaattcaagaagcagggcctggacatccgc
ctgggtgccaagctgtccaaggccgaggtcaagggcgacgaagtccacctcgcctacacc
gacgccaagggcgagcagtccctggtcgtcgacaagctgctggtggccgtcggccgccgc
gccggcacccagggccttctggccgagggcaccggcgtgcagctggatgagcgcggtcgc
gtggtcgttgacgaccactgctggacgggcgtggaaggcgtctgggcgatcggcgactgc
gtgcgcggcccgatgctggcgcacaagggttccgaagaaggcatcgctgtcgccgagctg
atcgccggcaaagcgggccatgtcaatctcgacacggtgccgtgggtcatctacacggaa
ccggaagtggcctgggtcggcaagacggaagagcagtgcaaggccgaaggtattccgtac
aagacgggatctttcccctttgccgccgtcggccgcgccgtggcgatgaacgagacagcc
ggcatggtgaaggtgatcgcccacgccgaaaccgatcgactgctcggcgtgcacatggtg
ggcgcctgcgtctcggaaatggtgcatgaagccgtggtggccatggagttcaagggttcg
gccgaagacctcgcccgcatctgccacgctcatccgaccctgagcgaagcggtgcacgaa
gcggctctcgcggtcgacaagcgcgccatccacaaggcgaactga
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