Tahibacter amnicola: N4264_12705
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Entry
N4264_12705 CDS
T09840
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tamn
Tahibacter amnicola
Brite
KEGG Orthology (KO) [BR:
tamn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tamn03032
]
N4264_12705
03400 DNA repair and recombination proteins [BR:
tamn03400
]
N4264_12705
Enzymes [BR:
tamn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N4264_12705
DNA replication proteins [BR:
tamn03032
]
Prokaryotic type
DNA Topoisomerases
N4264_12705
DNA repair and recombination proteins [BR:
tamn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N4264_12705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UXI70454
LinkDB
All DBs
Position
complement(3032108..3033202)
Genome browser
AA seq
364 aa
AA seq
DB search
MRHSPECDSDLPLDAPLASPAAISHCVDAGLRYVSDTEPGITRHRRGRGFIYRNPDGTRV
EDPAELARIRSLAIPPAYRDVWICTRADGHIQATGRDARGRKQYRYHADWRSVRDAAKYD
RLIAFGEGLGALRKRVKADLSRRGLPRERVLALVIAVLEHTLIRVGNPEYARTNRSFGLT
TLLNRHVRETRSRLTFRFRAKSGVMQEIALSDARLRILVRRCQELPGQSLFQYVDDDGVH
RPVSSQDVNAYIRDALGDDFSAKDFRTWAGSVIAGQLLSRADRPESPRAARRHITAAITA
VARALGNTPAVCRACYVHPAICEAYERDELLPLRRVPEGAAWQKAERATLRVLRRQARRR
RGAR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcgccacagtcccgagtgcgatagcgacctgcccctcgatgctccccttgcatcgccc
gccgcgatcagccactgcgtcgacgccgggctgcgctacgtcagcgataccgaaccaggg
atcacgcgtcaccgtcgtggccgtggattcatctatcggaacccggacggtacgcgcgtg
gaggatccggctgagctggcccgcatccgctcgctggccattccgccggcctatcgcgat
gtctggatctgcacgcgtgccgacggccatatccaggcgaccggccgtgatgcccgcggc
cgcaagcaataccgctatcacgccgactggcgcagcgtccgcgatgcggccaagtacgac
cggctgatcgctttcggcgaaggattgggcgcgctgcgcaagcgggtcaaggctgatctg
tcacggcggggactgccgcgcgaacgcgtcctcgcgctcgtcatcgccgtgctggaacac
accctgatccgcgtcggcaatccggaatatgcgcgcaccaatcgttcctttggcctgaca
accctgctcaaccggcacgtacgcgaaacccgttcgcgcctgacgttccgcttccgcgcc
aagagcggcgtgatgcaggaaattgcgctcagcgacgcgcggctgcgcatcctcgtgcgt
cggtgccaggagctgcctggccaatccttgttccagtacgtcgacgatgacggtgtgcat
cggcccgtcagctcgcaggacgtcaacgcctacatccgcgacgccctcggggatgacttc
agcgccaaggacttccgcacctgggccggttcggtgattgccgggcagctgctatcccga
gccgatcgcccggagtcgccgcgcgccgcacggcgtcacatcaccgcagcgatcaccgcc
gtcgcccgggccctgggcaatacgccggccgtatgccgtgcctgttacgtccatccggcg
atctgcgaagcctacgaacgcgatgaactgctgccgctacgccgcgtacccgaaggcgcc
gcctggcagaaggccgaacgcgccaccttgcgggtactgcgtcgccaggcgcggcggcgg
cgcggcgcacgctag
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