Tahibacter amnicola: N4264_18925
Help
Entry
N4264_18925 CDS
T09840
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tamn
Tahibacter amnicola
Pathway
tamn03030
DNA replication
tamn03430
Mismatch repair
tamn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tamn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N4264_18925 (dnaE)
03430 Mismatch repair
N4264_18925 (dnaE)
03440 Homologous recombination
N4264_18925 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tamn03032
]
N4264_18925 (dnaE)
03400 DNA repair and recombination proteins [BR:
tamn03400
]
N4264_18925 (dnaE)
Enzymes [BR:
tamn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N4264_18925 (dnaE)
DNA replication proteins [BR:
tamn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N4264_18925 (dnaE)
DNA repair and recombination proteins [BR:
tamn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N4264_18925 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
UXI66809
UniProt:
A0ABY6BAC2
LinkDB
All DBs
Position
4827502..4831053
Genome browser
AA seq
1183 aa
AA seq
DB search
MTARFVHLHVHSEYSLVDSTIRISSLVSACAKADLPALALTDQANLFALVKFYKECEKAG
VKPIAGADVWVANPADRNKPTRLTLLCQNRTGYLNLSRLVSRAYVEGQHGDFAQIDPAWF
SGQTEGLIALLGRESDLAHLILAGKPEAAAERCGFWLAHFNDRLYLEISRVGHASEAAFN
EGALHVAALVDCPVVATNDVRFLEKQDFNAHEARVCIHQGRVLADPKRPRDYTPEQYLKS
PDEMAALFADIPEALQNSVEIAKRCNLELSFGTYYLPAFPVPPEHTLDTFIREQARQGLA
ARLAKHGPAAGRTTEEYAERLEVEVDVIVKMGFPGYFLIVADFINWAKQNGIPVGPGRGS
GAGSLVAYCLGITDLDPLPYDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDYVARAYGR
DHVSQIITYGTMAAKAAVRDCGRVLGHPYGFVDGIAKLIPMTLGITLDDALGRSDKSRKD
SSLSSSELIQRYQEEEEVKALLDLACELEDLTRNAGKHAGGVVIAPSQLTDFAPLYCEAG
GTGVVTQFDKDDVESVGLVKFDFLGLRTLTIIDWAVKAINARRARSGLEPVDITAIPIDD
ADSYKLLKSCATTAVFQLESRGMKELIKKLQPDTFEDIIALVALFRPGPLQSGMVDDFIN
RKHGRAEVTYPHPKLEPVLKPTYGVIVYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPE
EMAKERVKFEAGSAENGVDAQLATSIFDLMEKFAEYGFNKSHSAAYALVSYQTAWLKAHF
PAEFMAAVLSSDMDNTDKVVNFLDETRAMNLRVLPPDVNASAYMFEALDNGAIRYGLGAI
KGVGQGACENIVAERERGGNYRDLLDFCQRVDLQKLNKRVLEALINAGALDALAPNRASL
MAQLPEVVKAAEQHLRDRIAGQNDMFGASSPAAPVLDLPVVDEWPLEQRLSGERETLGHY
LSGHPTDSWKSQLLQLATCPLGEIEQKYQPPKFKKKDDDENNRFRRGPDTPWTVAGQVVG
LRKRGDTMAFVQLEDWSGRIEVSFFREAFVEFSPLLTRDAILVVEGGLSFDDFSNAHQVR
ARSVLTLEQACERFARHVRLQLNGVGPAFADTLRNTLLSYRGGQTPVRLGYANRYAKAEL
ELGSEWRVRAGPDLTRALTKLDGVVNVDLQLARAVVPGNSSKE
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcacgatttgtccatctgcatgtccacagcgagtattcgctggtggattccacg
atccgcatctcgtcgctggtttccgcctgcgcgaaagcggacctgcctgcgctcgccctg
accgaccaggccaacctcttcgctctggtcaagttctacaaggaatgtgaaaaggccggc
gtcaagccgatcgccggtgccgacgtgtgggtcgccaatccggccgaccgcaacaagccg
acacgcctgaccctgctgtgccagaaccgcacggggtacctcaacctgtcgcgcctggtg
tcgcgggcctatgtggaaggccagcacggcgatttcgcccagatcgacccggcctggttc
agcggacagacggaaggcctgatcgccctcctggggcgtgaaagcgacctggctcacctg
attctcgccggtaagccggaagcggccgcagaacgctgcggcttctggctggcccatttc
aacgaccgcctgtacctggagatctcgcgcgtcggccacgccagcgaggcggcgttcaac
gagggcgcactgcatgtcgcggccctcgtggattgcccggtcgtggccaccaatgacgtg
cgctttctcgaaaagcaggatttcaacgcccacgaagcgcgcgtgtgcatccaccagggc
cgcgtgctggccgatcccaagcggccgcgcgactatacgcccgagcagtacctcaagtcg
cccgatgaaatggcggcgctgttcgccgatattcccgaggcgctgcagaacagtgtagaa
atcgcaaaacgctgcaatctggaactatccttcggcacctactacctgccggcgttcccg
gtgccgcccgagcacacgctcgacaccttcatccgcgaacaggcgcgccagggtctggct
gcacgactggccaagcacggcccggccgccggccgcaccaccgaggagtacgccgagcgt
ctggaggtggaagtcgacgtcatcgtcaagatgggcttcccgggctacttcctgatcgtc
gccgacttcatcaactgggccaagcagaatggcattcccgtaggaccagggcgcggatcc
ggcgccggttcgctggtcgcctactgcctgggcatcacggacctggatccactgccctac
gacctgctgttcgagcgattcctcaatcccgaacgcgtctccatgcccgacttcgacgtc
gacttctgcatggaccgtcgcgacgaggtcattgactacgtcgcccgcgcctacggtcgc
gaccacgtcagccagatcatcacctacggcaccatggcggcgaaggccgcggtgcgtgac
tgcggccgcgtgctgggacacccctacgggttcgtcgacggtatcgccaagctcatcccg
atgaccctgggcatcacgctcgacgatgccctgggccgctcggacaagtccaggaaagac
agctcgctgagctcgtccgaactgatccagcgttaccaggaagaggaagaggtcaaggca
ctgctcgacctcgcctgcgaactggaagacctcacgcgaaatgccggcaagcacgccggc
ggcgtcgtgatcgcgccgtcgcagctgacggacttcgcgccgctctactgtgaagccggg
ggcaccggcgtcgtcacccagttcgacaaggacgacgtcgaatcggtgggcctggtgaag
ttcgacttcctgggcctgcgcacgctcaccatcatcgactgggcggtgaaggccatcaat
gcccgccgcgcccgctccggcctggaacccgtcgacatcacggccatcccgatcgatgat
gccgacagttacaagctgctgaagtcctgcgccaccaccgccgtgttccagctcgaatcg
cgcggcatgaaggagctgatcaagaagctccagccggacacattcgaagacatcatcgcg
ctcgtggcgctgttccgccccggcccgctgcagtcgggcatggtggacgacttcatcaac
cgcaaacacgggcgtgccgaagtcacctacccgcatcccaagctcgaaccggtgctcaag
ccgacctacggcgtcatcgtgtaccaggaacaggtgatgcagatcgcccaggtgctcgcc
ggctatacgctcggcggcgccgatctcctgcgtcgcgccatgggcaagaagaagcccgag
gagatggccaaggagcgcgtcaagttcgaagccggctctgccgagaacggcgtcgatgcg
cagctggcgacctccatcttcgacctgatggaaaaattcgccgagtacggtttcaacaaa
tcgcactcggccgcctacgccctggtttcctaccagaccgcctggctcaaggcgcatttc
ccggccgaattcatggccgcggtgctgtcctcggacatggacaacaccgacaaggtggtg
aacttcctcgacgaaacacgcgccatgaacctgcgcgtgctgccgcccgatgtgaatgcg
tccgcgtacatgttcgaggcgctggacaatggcgccatccgttatggcctgggcgccatc
aagggcgtcggccagggggcctgcgagaacatcgtcgccgaacgcgagcgcggcggaaac
taccgcgacctgctcgacttctgccagcgtgtcgacctgcagaagctcaacaaacgcgtg
ctcgaagcgctgatcaacgccggcgcactcgatgcgctcgcaccgaatcgtgcctcgctg
atggcacagctgcccgaagtagtgaaggcggccgaacagcacctgcgcgaccgcatcgcc
ggccagaacgacatgttcggcgcctccagcccggccgcaccggtgctcgacttgccggtg
gtggacgagtggccgctggagcagcgcctgtccggcgagcgcgagacactcgggcactac
ctgtcgggccatcccacggattcgtggaaatcacagctgctccagctggccacctgcccg
ctgggcgagatcgaacaaaagtaccagccgcccaagttcaagaaaaaagacgacgacgag
aacaaccggttccgccggggaccggatacgccctggactgttgccggtcaggtcgtgggg
ctgcgcaagcgtggcgataccatggccttcgtccagctcgaggactggagcggccgcatc
gaggtcagcttcttccgcgaggccttcgtcgagttcagcccgctgctgacgcgggacgcg
attctcgtcgtcgagggcggactgtccttcgacgacttctccaacgcgcatcaggtgcgc
gcacgcagcgtgctgaccctggaacaggcctgcgagcgtttcgcgcggcatgtccgtctg
caattgaacggtgtcggcccggcatttgccgacacgctgcgcaacaccttgctgagctac
cgtggcggccagacccctgttcgcctgggctatgccaaccgctacgccaaggccgagctg
gaactgggcagcgagtggcgcgtccgtgcgggtcccgacctcacgcgtgccctgacaaag
ctcgacggcgtggtgaatgtcgacctgcagctcgcgcgcgccgtcgttcccggcaacagc
agcaaggaatag
DBGET
integrated database retrieval system
