Tahibacter amnicola: N4264_20575
Help
Entry
N4264_20575 CDS
T09840
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
tamn
Tahibacter amnicola
Pathway
tamn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tamn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N4264_20575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tamn03019
]
N4264_20575
Enzymes [BR:
tamn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
N4264_20575
Messenger RNA biogenesis [BR:
tamn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N4264_20575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Flavi_DEAD
HEM4
Motif
Other DBs
NCBI-ProteinID:
UXI67116
UniProt:
A0ABY6BAM7
LinkDB
All DBs
Position
5253320..5254645
Genome browser
AA seq
441 aa
AA seq
DB search
MSFDTLGLSPALLRALNEQGYTAPTPVQAEAIPLVLSGRDVMAGAQTGTGKTAAFSLPLL
ERLYPRGERKAETPRRVRALVLTPTRELALQVHDSMRAYGKYIRFSSAAIFGGVGMGGQV
QALRRGAEIIVATPGRLIDHLDQRTLSLANIEVLVLDEADRMLDMGFLPALKKILAQLPK
TRQNLFFSATYADEVKKLVNELLTDPVQVQIAQQNSVAATVTHRVYPVDMERKKDLLIQI
LAEDSRRQTLVFGRTKHGSDRLARQLCQAGFRADAIHGNKSQGARQRALKDFKEGRINVL
VATDIAARGLDIDQLPVVVNYDLPMVAADYVHRIGRTGRAGAEGLAVSLVCRAEQGQLQD
ILRLLKREIETVTVPGFEPAQPVRTELGAPRGAVRPNHQRRPHAGQPKGNSSGKHHPGKD
KRRSGAPGQRRDARGPAAPRR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcgacaccctcgggctgtcgcccgcccttttgcgcgccctcaatgaacagggc
tatacagcgccgacgccggtccaggccgaagcgatccctctcgtactctccggccgcgat
gtgatggccggcgcccagacgggtaccggcaagaccgccgcgttcagcctgcccctgctc
gaacggctctacccacgtggcgaacgcaaggccgagacgccgcgccgcgtgcgcgcgctc
gtgctcacgccgacgcgcgagctggccctgcaggtgcatgacagcatgcgcgcctacggc
aaatacatccgcttcagcagtgcggccatcttcggcggcgtgggcatgggcggccaggtc
caggcgctgcgccgtggcgcggaaatcatcgtcgccaccccgggccgcctgatcgatcat
ctcgaccagcgcacgctgagccttgcgaacatcgaagtgctggtgctcgacgaagctgac
cgcatgctcgacatgggcttcctgccggcgctgaagaagatcctggcccagctgccgaag
acgcgccagaacctgttcttctcggccacctacgccgacgaggtcaagaagctggtgaac
gagcttctcaccgacccggtgcaggtgcagatcgcccagcagaacagcgtggcagcgacc
gtcacgcaccgcgtgtatccggtcgacatggagcgcaagaaggacctcctgatccagatc
ctggccgaagacagccgtcgccagaccctggttttcggccgcaccaagcacggctccgac
cgcctcgcacgccagctgtgccaggccggtttccgcgccgatgccattcatggcaacaag
agccagggcgctcgccagcgcgcgctgaaagatttcaaggaaggccgcatcaacgtgctg
gttgccacggatatcgccgcgcgcggcctggatatcgaccagctgccggtggtcgtcaac
tacgacctgccgatggtcgccgctgactacgtgcaccgcatcggccgcaccggccgcgcg
ggcgccgagggcctggcggtttcgctggtctgtcgcgccgagcagggccagctccaggac
atcctgcgcctgctcaagcgcgaaatcgaaacagtcacggtgcccggcttcgagccggcc
cagccggtgcgtactgaactgggcgcgccgcgcggcgcggtcaggcccaaccaccagcgt
cgcccgcacgccggccagcccaagggcaattccagcggcaagcaccacccgggcaaggac
aagcgtcgcagcggcgccccgggccagcgtcgcgatgcacgcggtccggccgcaccgcgc
cgctga
DBGET
integrated database retrieval system
