Tahibacter amnicola: N4264_21670
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Entry
N4264_21670 CDS
T09840
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
tamn
Tahibacter amnicola
Pathway
tamn02020
Two-component system
tamn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tamn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
N4264_21670
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
N4264_21670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tamn03000
]
N4264_21670
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
tamn02035
]
N4264_21670
Transcription factors [BR:
tamn03000
]
Prokaryotic type
Helix-turn-helix
Other families
N4264_21670
Bacterial motility proteins [BR:
tamn02035
]
Flagellar system
Flagellar assembly proteins
Others
N4264_21670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
AAA_16
AAA
Mg_chelatase
AAA_19
HTH_50
bpMoxR
AAA_2
TIP49
nSTAND3
AAA_7
Motif
Other DBs
NCBI-ProteinID:
UXI67321
LinkDB
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Position
5530281..5531774
Genome browser
AA seq
497 aa
AA seq
DB search
MSESRILIVDADRERGDRIGAILDFMDLTPTVLECAGDLRLKRHTPQDWLAIVVGTVNER
DPWNTFASWLADDPMHPPLLVMSDDGKVEPNGLGVNGASVWALDYPIKQTQLNDLLRRAS
IKRLDDSARAETPRGGPSGSSAAVQRLRRMIEQVAKFDTTVLILGESGSGKEVVARAIFE
HSARAKGPFIAMNCGAIPSELMESELFGHEKGAFTGAVSARKGRFELAEGGTLFLDEIGD
MSLPMQVKLLRVLQERRFERVGGDTTIQCNVRVIAATHRNLEASIEKGTFREDLYYRLNV
FPIEVPSLRERTDDLGELVNVLAHQLAGHGRARIRLSPDALRVLRTYAWPGNVRELSNLV
ERLSVLHPGQVIEVDDLPVRYRANAGNAAPVNVAAASAPPAGSTGTPAAVLTDAGARAAP
PMYAPSVLPPDGLDLKEHIGSIESTLIRAALERADGVVAHAAQLLRLRRTTLVEKLRKYG
LGRESLIDEGESDTHVN
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatcccgcatactcatcgtcgatgccgaccgcgagcgcggagatcggatcggg
gccatccttgatttcatggacctgacgccgacggtgctcgaatgtgccggtgacctgcgc
ctgaaacggcacacgccgcaagactggctggcgatcgtcgtcggcacggtcaacgaacgc
gatccgtggaacaccttcgcgtcgtggctggcggatgacccgatgcatccgccgctcctg
gtcatgagcgacgacggaaaagtcgagccaaacggcctgggtgtcaacggcgccagtgtc
tgggcgctggactaccccatcaagcagacgcagctcaatgatctgctgcgtcgcgccagc
atcaagcgcctggacgacagcgcgcgcgctgaaacgccacgtggcgggcccagcggttcc
agtgccgcagtgcagcgcctgcgccggatgatcgagcaggtcgccaaattcgataccacc
gtgctgattctcggcgagtccgggtccggcaaggaagtcgtggcacgcgccatctttgaa
cactcggcgcgggccaagggccccttcatcgcgatgaattgcggcgccattccctcggaa
ctgatggaaagcgaacttttcggccacgagaagggcgcgttcaccggcgctgtctcggcg
cgcaagggccgcttcgaactggccgagggcggcaccttgttcctggacgagatcggcgac
atgagtctgccgatgcaggtgaagctgctgcgcgtgctccaggagcgacgtttcgaacgc
gtcggcggcgataccacgatccagtgcaatgtgcgcgtgatcgcggcaacccaccgcaac
ctcgaagcctcgattgaaaagggcaccttccgcgaggatctctattaccgcctgaacgtc
ttcccgatcgaagtgccgtcgctgcgcgagcgcaccgatgacctcggtgagctggtcaat
gtgctggcgcaccagctcgctggtcatggacgcgcccgcatccgcctgtcacccgatgcg
ctgcgcgtgctgcgcacctacgcgtggccgggcaatgtgcgcgaactgtcgaacctggtg
gagcgcctgtcggtgctgcatccgggccaggtcatcgaggtcgacgacctgcccgtgcgc
taccgggccaatgcgggcaacgccgcgccggtgaatgtcgcagccgccagcgcgccgccg
gcaggaagcacaggcacgccagcggcggttctcactgacgctggcgcacgcgccgcgccg
cccatgtacgcaccgtcggttctgccgccggacggcctggatctcaaggaacacatcggc
agcatcgagtcgacgctgatccgcgccgcgctcgaacgtgccgacggtgtcgtcgcgcat
gccgcgcaactgttgcggctgcgtcgcacgacgctggtcgaaaagctgcgcaagtacggg
ctcggccgtgaaagcctgatcgacgaaggcgaaagcgacactcacgtcaattga
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