Tahibacter amnicola: N4264_23145
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Entry
N4264_23145 CDS
T09840
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
tamn
Tahibacter amnicola
Brite
KEGG Orthology (KO) [BR:
tamn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tamn03016
]
N4264_23145 (thpR)
Enzymes [BR:
tamn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
N4264_23145 (thpR)
Transfer RNA biogenesis [BR:
tamn03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
N4264_23145 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
UXI67601
LinkDB
All DBs
Position
complement(5856656..5857210)
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AA seq
184 aa
AA seq
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MSRPSSSAARRLFFALWPTPPVRVALAEVVDDLRRRCTGGGRWVRPARFHVTLQFLGDFA
ADCSERALSDAVAAGDAVTMMPFALSFDHVARFSRHRAPWWLGVTQTPEPLNRLWTDLGA
ALRQRGLRVECGPYVPHLTIRRDPPGDPPAVPVAPVTWPVDHFVLIDSQLAQDTAYVEIA
RWPR
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggccatcgtcatctgccgcgcgtcgactgttttttgcgttgtggccgacgccg
ccggtgcgcgtcgcgctggccgaggtggtcgacgacctgcgtcgtcgttgcaccggtggt
ggtcgctgggtgaggccggcgcgcttccatgtcacgttgcaattcctcggcgattttgcg
gccgattgcagcgagcgcgccctgagcgacgcagtggccgcaggcgatgccgtgaccatg
atgccgttcgcgttgtcgttcgatcatgtggcgcggttttccaggcaccgcgcgccgtgg
tggctaggtgtcacgcagacaccggaaccgctcaatcgcttatggaccgacctgggcgct
gctctgcgccagcgcggtctgcgcgtggaatgcgggccctatgtgccgcaccttacgatc
cggcgcgatccgcccggtgatccgccggccgtgccagtggcacccgtgacctggccggtc
gatcatttcgttctcatcgatagccagctcgcgcaggacactgcctatgtggagatcgcg
cgttggccgcgctga
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