Tahibacter amnicola: N4264_23605
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Entry
N4264_23605 CDS
T09840
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
tamn
Tahibacter amnicola
Pathway
tamn00020
Citrate cycle (TCA cycle)
tamn00640
Propanoate metabolism
tamn00660
C5-Branched dibasic acid metabolism
tamn00720
Other carbon fixation pathways
tamn01100
Metabolic pathways
tamn01110
Biosynthesis of secondary metabolites
tamn01120
Microbial metabolism in diverse environments
tamn01200
Carbon metabolism
Module
tamn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
tamn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
tamn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
N4264_23605 (sucD)
00640 Propanoate metabolism
N4264_23605 (sucD)
00660 C5-Branched dibasic acid metabolism
N4264_23605 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
N4264_23605 (sucD)
Enzymes [BR:
tamn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
N4264_23605 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
UXI67689
LinkDB
All DBs
Position
complement(5966747..5967619)
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AA seq
290 aa
AA seq
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MSVLINKNTKVICQGFTGQQGTFHSEQAVDYGTRLVGGVTPGKGGTQHIGLPVFNTVQDA
VDETGADASMIFVPPPFAADAILEAADAGIKVIVAITEGIPVLDMLRVKNALKAYPDTVL
IGPNCPGVITPGECKIGIMPGHIHKPGKVGIVSRSGTLTYEAVFQTTNAGLGQSTCIGIG
GDPINGLNFIDCLRLFQDDPQTEGIIMVGEIGGSAEEEAAEFIAEYVTKPVVAFIAGASA
PAGKRMGHAGAIISGGKGTAAAKFAALEKAGVTTVKSPADLGKTLVARMS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttttgatcaacaagaacaccaaggtcatctgccagggcttcaccggccagcag
ggcaccttccactccgaacaggccgtcgactacggcacgcgtctggtcggcggcgtgact
cccggcaagggcggcacgcagcacatcgggctgccagtcttcaataccgtgcaggacgcg
gtcgacgaaaccggcgccgatgcgtcgatgatcttcgtgccgccgccgttcgcggccgat
gccatcctggaagccgccgatgccggcatcaaggtcatcgtggcgatcaccgagggtatt
ccggtgctggacatgctgcgcgtgaagaacgcgctcaaggcctatccggatacggtgctg
atcgggccgaactgcccgggcgtgatcacgccgggcgagtgcaagatcggcatcatgccg
ggccacatccacaagccgggcaaggtcggcatcgtgtcccgttcgggcaccttgacctat
gaagccgtgttccagacgaccaacgcgggcctgggccagtccacctgcatcggcatcggc
ggcgatccgatcaacggcctgaacttcatcgactgcctgcgcctgttccaggacgatccg
cagaccgagggcatcatcatggtcggcgagatcggcggcagcgccgaagaggaagccgcg
gaattcatcgccgagtacgtcaccaagccggtcgtcgcgttcatcgccggcgcctcggcc
ccggcgggcaagcgcatgggtcatgccggtgcgatcatctccggtggcaagggcacggcg
gccgcgaagtttgcggcgctggaaaaggcgggcgtcaccacggtgaaatcgccggctgac
ctgggcaagaccctggtcgcgcgcatgtcgtaa
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