Tahibacter amnicola: N4264_23620
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Entry
N4264_23620 CDS
T09840
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
tamn
Tahibacter amnicola
Pathway
tamn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
tamn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
N4264_23620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
tamn02022
]
N4264_23620
02035 Bacterial motility proteins [BR:
tamn02035
]
N4264_23620
Two-component system [BR:
tamn02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
N4264_23620
Bacterial motility proteins [BR:
tamn02035
]
Pilus system
Twitching motility proteins
N4264_23620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
Mg_chelatase
HTH_23
HTH_20
HTH_50
AAA_22
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UXI67692
UniProt:
A0ABY6BIL1
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All DBs
Position
5970801..5972237
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AA seq
478 aa
AA seq
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MSKQTALVIDDERDIRELLTITLGRMNLDVDTVGSVGEAREMLAQRKYDLCFTDMRLPDG
SGQEVIELIARQYPDTPVAMITAYGNVDAAVTALKAGAFDFVSKPVDLAMLRRLVQTALR
LSEERRAGAVAVDGKLVGDSPAMQQVRATISKLARSQAPVYISGESGVGKELVARQIHEQ
GPRASGPFVPVNCGAIPSELMESEFFGHKKGSFTGAHADKDGLFQAAHGGTLFLDEVAEL
PLHMQVKLLRVIQEKSVRAIGGRTELAIDVRILSATHKNLAKLVEQGYFRQDLYYRINVI
ELRVPPLRERKEDVPKLVGRVLERLAADSGSAPARLKPEALKCLLEYDFPGNVRELENVL
ERAVALCEGNNVDVDDLGLSRPAPGEPMTQRADHGRETRSPDVPRTAEPVPAYAETAIPP
PTPGIGMPADLAKAIADTERAAIMKALEATRWNRTAAAKQLGLTLRQLRYRLERLGIE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacagaccgccctggtgatcgatgacgagcgcgacatccgcgagctgctcacg
atcacactggggcgaatgaaccttgacgtcgatacggtcggcagcgtcggtgaagcgcgc
gaaatgctcgcccagcgcaaatacgacctgtgcttcactgatatgcgcctgcccgacggt
tccgggcaggaagtcatcgagctgattgcgcgccagtatccggacacgccggtcgcgatg
atcacggcctacggcaatgtcgatgccgccgtcaccgcgctcaaggccggcgccttcgat
ttcgtctccaagcccgtggacctggccatgctgcggcgcctggtccagaccgccctgcgg
ttgtcggaagaacgtcgcgccggcgctgtagccgtcgacggcaagctcgtgggcgactca
cccgcgatgcagcaggtccgcgccacgatctccaagctggcccgaagccaggcccccgtc
tacatcagcggcgagtcgggcgtgggcaaggaactggtggcccgccagatccatgagcaa
gggccgcgcgccagcgggccgttcgtacccgtgaactgtggtgctattccgtcggaattg
atggaaagcgagttcttcggccacaagaagggcagcttcaccggcgcccatgccgacaag
gacggcctgttccaggccgcgcacggcggcacgctgttcctggacgaagtggccgaactg
ccgttgcacatgcaggtaaaactgttgcgcgtgatccaggaaaaatccgtccgtgccatc
ggcggacgcaccgaactggcgattgatgtccgcattctctcggcgacgcacaagaacctc
gccaagctcgtcgaacagggctatttccgccaggatctctactaccgcatcaacgtgatc
gagctgcgcgttccgccactgcgcgagcgcaaggaagacgtccccaagctggttggtcgc
gtgctcgaacggctcgccgccgactccggatccgcccccgcgcgcctgaagcccgaagcg
ctcaagtgcctcctcgagtacgactttcccggcaatgtgcgcgaactggaaaatgtgctc
gagcgcgccgtggccctgtgcgagggcaacaacgttgatgtggacgacctgggattgagc
cgccccgctccgggcgagcccatgacccagcgcgccgatcacggacgcgagacccgcagc
ccggatgtcccccggaccgccgagccggtgccggcctacgcggaaacggcgattcccccg
ccgacgcccggtatcggaatgcccgccgaccttgcaaaggccattgcagacaccgagcgc
gccgccatcatgaaggcgcttgaagcgacgcggtggaatcgcacggcggccgccaagcag
ctcggcctgaccctgcgccagttgcggtaccgactggagcgcctgggaatcgaatag
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