KEGG   Tahibacter amnicola: N4264_24255
Entry
N4264_24255       CDS       T09840                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
tamn  Tahibacter amnicola
Pathway
tamn02020  Two-component system
Brite
KEGG Orthology (KO) [BR:tamn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    N4264_24255
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:tamn02022]
    N4264_24255
Two-component system [BR:tamn02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   N4264_24255
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 Mg_chelatase AAA_16 HTH_7 AAA nSTAND3 VpsR AAA_22 BRCA2DBD_OB2 BrxC_BrxD IF2_N Zeta_toxin
Other DBs
NCBI-ProteinID: UXI67810
UniProt: A0ABY6BHF9
LinkDB
Position
complement(6114329..6115708)
AA seq 459 aa
MASGQILVVDDEPDIRSLIKEILEDEGYQVSTAENAEAAREVRRQSRPDVILLDIWMPDT
DGISLLREWAERGGLPCPVIMISGHGTVETAVEATRLGAYDFVEKPISLAKLLLTVERAF
EAGQLKRENEGLKRQVPVPLEPVGSSRPMQALRGQLERLAGHDTWLLMMGEPGSGKESLA
RWLHEKSARRIGPFVTVAPGSLAREHATQALFGLEDSGGVQQGLLEQANGGTLFLDEVAE
LDPELQLRLSSTLERRELIRCGGREPVNLDIRVVAATAQDLDNLVAAGRFREELYYQLKV
VPLAVPALRERVEDVPELLQYYADFFANRDKLPYRLFPVAVQNRLRNYGWPGNLRELRNL
VQRLLILGSVPEVDLIEVEQALGHGAGTRAPRGEGFDIDYGLPLREAREQFERVYLLRQL
HEAGGSVGKLAKVVGMERTHLYRKLRDLGVDVKAVARED
NT seq 1380 nt   +upstreamnt  +downstreamnt
atggcatccggtcagattctcgtcgtcgatgacgaacccgatattcgcagcctgatcaag
gagatcctcgaggacgaggggtaccaggtcagcaccgccgagaatgccgaagccgcgcgc
gaggtgcgtcgccagtcgcggcccgacgtgattctgctcgacatctggatgcccgacacg
gacggcatcagcctcctgcgcgagtgggcggagcggggcggactgccgtgcccggtcatc
atgatctccggtcacggcaccgtggaaacagcggtcgaagccacgcgcctgggcgcgtat
gactttgtggaaaaacccatttcgcttgccaagctgctgctgacggtcgagcgggcgttc
gaggccggccagctcaagcgcgagaacgaagggctcaaacgccaggtgccggtaccactg
gagccggtgggctcgtcgcggccgatgcaggccctgcgcggccagctcgaacgcctggcg
ggccacgatacgtggctgctgatgatgggcgagccgggcagtggcaaggagtcgctggcg
cgctggctgcacgagaagagcgcgcggcgcatcgggcccttcgtgactgtcgcgccgggc
tcgctggcacgcgagcacgccacgcaggcgctgttcggtctggaagacagcggtggcgtt
cagcagggcctgctggagcaggccaatggcggtaccctgtttctggacgaggtcgccgag
ctcgatccggagctgcagctgcgtctttcctccacgctcgaacgccgtgagctgatccgt
tgcggcgggcgcgagccggtgaacctcgatatccgcgtcgtcgcggccaccgcgcaggat
ctggacaatctggtcgccgccggccgcttccgcgaggagctctactatcagctcaaggtc
gtcccgctggccgtgcctgcgctgcgcgagcgcgtggaggacgttcccgagctcctgcag
tactacgctgactttttcgccaaccgcgacaagttgccttatcgccttttcccggtcgcc
gtgcagaaccgcctgcgcaactatggctggcctggcaacctgcgcgagctgcgcaacctg
gtgcagcggctgctgatcctgggcagcgtgcccgaggtggatctgatcgaagtcgaacag
gccctgggacatggcgccggcactcgcgcgccccgcggcgagggattcgacatcgactac
gggctgcccttgcgcgaagcccgcgagcagttcgagcgtgtctacctgctccgccagctc
cacgaagccggcggcagcgtcggaaaactggcgaaagtcgtcgggatggagcgcacgcac
ctctaccgcaaactgcgcgacctcggcgtggacgtcaaagcggtcgcccgcgaggactag

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