Tahibacter amnicola: N4264_24380
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Entry
N4264_24380 CDS
T09840
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
tamn
Tahibacter amnicola
Brite
KEGG Orthology (KO) [BR:
tamn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tamn03000
]
N4264_24380 (rtcR)
Transcription factors [BR:
tamn03000
]
Prokaryotic type
Other transcription factors
Others
N4264_24380 (rtcR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
AAA
AAA_16
NACHT
AAA_22
MCM
AAA_33
AAA_19
ATPase_2
AAA_7
AAA_2
IstB_IS21
AAA_14
Motif
Other DBs
NCBI-ProteinID:
UXI67833
LinkDB
All DBs
Position
complement(6148186..6149778)
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AA seq
530 aa
AA seq
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MAKRTVIIGFIGTQLDGGNGPGRWDKWRPTISLGMHEDFLPYRLELLIDQRKYARLAEVV
CADLRQVAPEIQVRANNLALVDPWDFETVYAALHDFCASYPFDLDQEEYFVHITTGTHVA
QICWFLLAESRHFPGCLLQTSPPAQQGKGLPGTFSVIDLDLSRYDRIAQRFQRERQEDRT
FLKSGIATRSAAFNRLIDEIETVAIRSSAPILLMGPTGAGKSQLARRVFELKKLKHQLPG
GFVEVNCATLRGDGAMSALFGHIKGAYTGAGADRAGLLRSAHRGLLFLDEIGELGIDEQA
MLLRALEEKRFLPVGSDREVESDFQLIAGTNRDLALRVQDGRFRDDLFARLNLWTFCLPG
LAERREDIDPNLDHELDRYARQNNQRVTFNREARDRYLRFATSPQALWLGNFRDLGASVM
RMATFALGGRIQAETVDDEIVRLKRLWRTPGAAADILADCLGEKAGDVDRFDAVQLRDVI
DVCRRSRTLSEAGRELFAASRRQRTSTNDADRLRKYLARFGLSWESVQKT
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgcaccgtcatcatcggattcatcggcacccagctcgacggcggcaacggc
cccgggcgctgggacaagtggcggcccacgatctcgctgggcatgcacgaggatttcctc
ccctaccggctggagctgctcatcgaccagcgcaagtacgcgcgcctggccgaggtcgtt
tgtgcggatctgcgccaggtggcaccggaaatccaggtgcgcgcgaacaacctcgccctg
gtcgacccctgggatttcgaaacggtctacgcggcgctgcatgacttctgcgccagctac
cccttcgatctggaccaggaggagtacttcgtccatatcacgacgggtacgcacgtggcg
cagatctgctggttcctgctggccgagagccggcattttcccggatgcctgctgcagacc
tcgccccccgcgcagcagggcaaggggctgccaggcacgttcagcgtcatcgacctcgac
ctgtcgcgctacgaccgcatcgcccagcgcttccagcgtgagcgccaggaagaccggacc
ttcctcaagagcggcatcgccacccgcagcgccgcgttcaaccggctgatcgacgagatc
gagaccgtcgcgatccgttccagcgcgcccatcctgctgatggggccgaccggcgccggc
aagagccagcttgcgcgtcgcgtgttcgaactgaagaagctcaagcaccagctcccgggc
ggtttcgtcgaggtcaactgcgcgacgctgcgcggcgacggcgccatgagcgcgctgttc
ggccacatcaagggcgcgtacaccggagcgggtgcggatcgcgcaggtttgttgcgttcg
gcgcaccgtggcctgcttttcctcgacgaaatcggtgagctgggcatcgacgagcaggcc
atgctgttgcgcgcactggaggaaaagcgcttcctgccggtgggcagcgaccgtgaagtg
gaaagcgacttccagctgatcgccggcaccaaccgcgatctcgccctgcgcgtgcaggat
gggcgtttccgcgacgatctcttcgcgcgtctgaacttgtggacattctgcctgcccggg
ctggccgaacgccgcgaagacatcgatccgaacctggaccacgaactggaccgctacgcc
cggcagaacaaccagcgcgtgaccttcaaccgcgaagcgcgggatcgctacctccggttc
gccacgtcgccgcaggccctgtggctgggaaatttccgcgacctgggcgcgtccgtgatg
cgcatggccaccttcgcgcttggcgggcgtatccaggccgagacggtggatgacgagatt
gtccggctcaagcgcctgtggcgcacgcccggcgcggcggcggacattcttgccgactgc
ctgggggaaaaggccggggatgtcgaccgcttcgatgcggtgcagctgcgcgacgtgatc
gacgtctgccggcgttcacgcaccttgtccgaagccgggcgcgagctttttgccgcctcg
cgccgtcagcgtaccagcacgaacgatgcggatcgcctgcgcaaataccttgcgcgtttc
ggcctgagctgggaatcggtacaaaagacgtag
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