Theileria annulata: TA04990
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Entry
TA04990 CDS
T00253
Name
(RefSeq) u6 snrna-associated sm-like protein lsm4, putative
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
tan
Theileria annulata
Pathway
tan03018
RNA degradation
tan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TA04990
09123 Folding, sorting and degradation
03018 RNA degradation
TA04990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tan03019
]
TA04990
03041 Spliceosome [BR:
tan03041
]
TA04990
Messenger RNA biogenesis [BR:
tan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
TA04990
mRNA degradation factors
5'-3' decay
Lsm complex
TA04990
Spliceosome [BR:
tan03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
TA04990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
3864700
NCBI-ProteinID:
XP_955211
UniProt:
Q4UBR6
LinkDB
All DBs
Position
3:complement(<1129059..>1129650)
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AA seq
105 aa
AA seq
DB search
MVLPLTLLRAGKSQPTLIELKNGETYSGILDSCDAFMNMHMVNVVCTSKSGTDFWKLDEC
FIRGNTVKSLRLPNEVAEIAKEEKHPRKYRKKLLYMERRWRRNEG
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atggtgttacctttaactcttttgagggctgggaagagccaacccactttgattgagcta
aaaaatggcgagacttatagtggaattttggactcttgcgatgcatttatgaatatgcac
atggtaaatgtcgtttgtacctcaaagagtggaaccgacttttggaagctagacgagtgt
tttattagagggaacacggttaaatctctaagattgccaaacgaggtggctgaaattgca
aaggaagaaaaacacccacgtaagtatagaaaaaaactattatatatggagaggagatgg
aggaggaatgaggggtag
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