KEGG   Theileria annulata: TA07745
Entry
TA07745           CDS       T00253                                 
Name
(RefSeq) U6 snRNP protein Lsm2, putative
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
tan  Theileria annulata
Pathway
tan03018  RNA degradation
tan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    TA07745
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TA07745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tan03019]
    TA07745
   03041 Spliceosome [BR:tan03041]
    TA07745
Messenger RNA biogenesis [BR:tan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     TA07745
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     TA07745
Spliceosome [BR:tan03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    TA07745
 Complex C
  U2 snRNP components
    TA07745
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 3862783
NCBI-ProteinID: XP_952975
UniProt: Q4UA02
LinkDB
Position
4:complement(608817..609234)
AA seq 112 aa
MVNFIHKPINCFSYFIIFFKVWSRRMRRNDLQISGKLHSVDQYLNIKLTNVTANDTQRYP
HLVLIYKLSVVNCFVRGSVVRYVFFNPSDINTEELQELCRRQAMKLNLDKSH
NT seq 339 nt   +upstreamnt  +downstreamnt
atggtaaattttatacataaacctataaattgctttagttattttataatttttttcaaa
gtttggtcgagaagaatgcgaaggaacgacttacaaatctcaggcaaacttcactccgtc
gatcaatatctcaacataaagcttacaaacgtcaccgctaatgacactcaacgttatccg
catctggtacttatttataaattgtctgtagtaaattgttttgttcgcgggtctgtagtc
cgctatgtattttttaatccgtctgatataaatactgaggaattgcaagaactatgtaga
aggcaagcaatgaagctaaatcttgacaaatctcactaa

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