Theileria annulata: TA11620
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Entry
TA11620 CDS
T00253
Name
(RefSeq) hypothetical protein
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
tan
Theileria annulata
Pathway
tan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TA11620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tan03019
]
TA11620
Messenger RNA biogenesis [BR:
tan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
TA11620
U7-dependent histone pre-mRNA processing factors
TA11620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
Beta-Casp
CPSF100_C
Motif
Other DBs
NCBI-GeneID:
3861889
NCBI-ProteinID:
XP_952561
UniProt:
Q4UDL0
LinkDB
All DBs
Position
2:<1664815..>1667631
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AA seq
830 aa
AA seq
DB search
MNIVNVEPLIHGELLATKISFKFQDKDGNYDKDNFLNVLLNCGWSLDFSEEKLNLYKKYA
QNVDVILITDGDFLHSGALLWLTSRFLTELKGKSIPKILCTEGTYKFMRASLIDVLENVT
FSTDFGYYSMDDLELLDSNCVKLRYSETYCHMKKLQNLDVKSSFCALNNGYSVGGAIWKI
SVGYNTVICGDKIRIYTGTLLNGANINDILNPDLLVLSHEDVETPKHVTDPKGVKVCEDL
NSLTDKLFTTLTKGGNILFPMDVDYTLLNLLIHLNMIWSTSQLSQFKIVLASPIADKLML
FIGTCLEYMKTSIFHNFIKTLWNPFMDLNHIEIITSLGQLSRYRFRPTVFISTTSNMDFG
FSNFLFLAISSYYKNLVVLTKPNQSVTKYVYNRNNSGVQAPQYKETRLINVLDDEPEEQE
NEKIGNDTYLQNYTNLAGQSQFHMNNLQNTELDSKNIQDYGLPFNDLLADPANPYGYTEL
PAYEGEFESEVYNAQEQNENSELDDYYRKYLDDPKNKLFDMDSTDEAYQKSDFMTKKFPF
CVKSDICIVNSLCNILKETQMPSLLYRIQPRNAVLIPTSESSLVSEKYLSKLLRCKLHSF
YENKRVKNEPENKNPESNERIKSLVSVDLNFNNFPVMLNLNLLTAVKNFFNKPPPTELVK
RTAGNYQTINTVLNSLEQWKYKNNRVKSCQILGKLTCAEESQQDPPKTNLVSCHTFWSDE
CNKKSKLEFVIEDKENNDPETENYQVKNSIKSTLLIGNVSMANYTKFLDDCIPNAISMIS
GSAVINDKVIVSKHSNTYSNQWVIEGTLDPSYYLARKLLRKLHNRIEPIY
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtgaacgtagaaccactaatacatggagaattattagcgaccaaaatttcc
tttaaatttcaggataaagatggaaattatgataaagataattttctaaatgtattatta
aactgcggctggtcgctagattttagtgaagagaaattgaacctgtataagaaatatgcc
caaaatgttgatgtcatactaataacagacggcgactttctacactcaggcgccctgtta
tggttgacatctagattcctaactgaattgaaagggaaatccatacctaaaatattgtgt
acagaaggaacatacaaattcatgagagcatcactaatagatgttttagaaaacgtaaca
ttttctactgatttcggatattatagtatggatgatttggaacttttagactcaaattgc
gtaaagctaagatacagtgaaacatactgccacatgaagaagttgcagaatcttgatgtt
aaatctagtttctgcgctttaaacaacggatattctgtaggaggagcgatttggaaaatt
tcagtaggatataatacggtaatttgtggagacaaaataaggatatacacaggaacttta
ctcaatggagccaacattaacgacatactcaacccagatttgttggtcctcagccatgaa
gatgtcgagacgccaaaacacgttactgaccccaaaggagttaaagtgtgtgaagacttg
aacagcctaactgacaagctgtttacaacacttaccaaaggaggtaacatcctgttccca
atggacgtagactacactctactcaatctattgatccacctaaacatgatatggtctaca
tcgcaactatctcagtttaaaatagtcctcgcctcaccaatcgcagacaaacttatgtta
ttcataggaacatgcctagaatacatgaaaacgagcattttccataattttattaagacg
ctctggaacccatttatggacctgaatcacatagaaatcatcacctcactgggtcaactg
tcaagatacagattcagaccaacagtgttcatatcaacgacatcgaatatggattttggg
ttttctaactttctgttcttggctatttcctcatactacaaaaacctggtagtactcaca
aagccaaatcaatcagtaacaaagtacgtgtataacaggaataactcaggagtacaagca
ccccaatataaggaaacaagactaataaatgtattagatgatgaacctgaagaacaggaa
aatgagaagataggaaatgacacatatctacaaaattacactaatttagcaggccaaagc
cagtttcatatgaataacctacaaaatacggagctggactctaaaaacatacaagactat
ggactaccatttaacgatttattagcagatcctgcaaacccttatggatatacagaattg
ccagcctatgaaggtgaatttgaatcggaagtatacaatgcacaagaacaaaacgaaaat
tcagaattagatgattactacagaaagtatttagatgacccaaaaaataaattatttgat
atggacagtacagatgaagcataccaaaaatcagatttcatgaccaaaaagtttccattc
tgtgttaagtcagatatttgtatagtaaacagcctgtgtaacattttaaaggagacacaa
atgccgagtcttctgtatcggatacaaccaaggaatgctgtattaataccaacatcggaa
tcgtcactagtaagtgaaaaatacctctcgaaactgctgaggtgtaagcttcactccttc
tacgaaaacaaaagagtaaaaaatgaacctgaaaataaaaatccggaaagtaatgagaga
ataaaatccttagtctcagttgatttaaatttcaataacttcccagtcatgctcaattta
aacctactcacagcagtcaagaattttttcaacaagccgcccccgacggaattggtgaaa
agaacagcaggaaactatcagacaataaacacagtgttaaattcattagaacaatggaaa
tataaaaataacagagttaaaagctgccaaattttagggaaactaacatgtgccgaggaa
tcacaacaagacccaccaaaaacaaacttggtgagctgtcacacattctggtcagacgaa
tgtaacaaaaaatctaaattagagttcgttatagaagataaagaaaataatgatccagag
actgaaaactatcaagttaaaaatagcataaagtcaacgctcctaataggaaatgtaagt
atggcaaactataccaagttcctagatgactgtatacccaacgcaatcagtatgatatca
ggctcagcagtgataaatgacaaagtgatcgtctccaagcactcaaatacatattctaac
caatgggtaatagagggaacgttggatccaagctattatctagccagaaaattgctgaga
aaactacataataggatcgaaccaatttattag
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