Theileria annulata: TA12825
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Entry
TA12825 CDS
T00253
Name
(RefSeq) hypothetical protein, conserved
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
tan
Theileria annulata
Pathway
tan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TA12825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tan03021
]
TA12825
03019 Messenger RNA biogenesis [BR:
tan03019
]
TA12825
Transcription machinery [BR:
tan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
TA12825
Messenger RNA biogenesis [BR:
tan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
TA12825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_CCCH_4
Torus
zf-CCCH
zf-CCCH_RBM22
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
3861777
NCBI-ProteinID:
XP_952344
UniProt:
Q4UE77
LinkDB
All DBs
Position
2:<1239762..>1240306
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AA seq
171 aa
AA seq
DB search
MDFSTLLYEAIDTQNNHFKNPEDDQKNDKEDPLITLALDVLKRDSEKVALLRLKGFERVD
IERSSGKHSVVCRHWLKGMCMKGEFCDFLHQLVYSRMPPCKSVEKNSFCTDRLKGCCIFK
HTGDDESTDFLGSKENKNDLDHSDDLSYKNDLEKFTHAFNSALLFAFPRIV
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atggatttttcaaccttgttatatgaagccattgatacccaaaacaaccattttaaaaat
ccagaggatgatcaaaaaaatgacaaagaagatcctcttataacattggcacttgatgta
cttaaaagggatagtgagaaggtagccttgctaaggttaaaaggctttgaaagggttgat
attgagcgcagtagcggaaaacattcagtagtttgtcgccattggctcaaagggatgtgt
atgaagggtgaattctgtgattttttacatcagcttgtatattcaaggatgcctccttgt
aaatctgttgagaaaaactctttttgtactgatagattaaagggctgttgtatatttaag
catactggtgatgatgaatctaccgattttctcggatcaaaggaaaataaaaatgatctt
gaccactcggatgacctttcatacaaaaatgatcttgagaagttcacacatgcctttaac
tctgctctactgttcgcatttccaaggattgtataa
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