Theileria annulata: TA13610
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Entry
TA13610 CDS
T00253
Name
(RefSeq) ATP-dependent RNA helicase, putative
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
tan
Theileria annulata
Pathway
tan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TA13610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tan03019
]
TA13610
03041 Spliceosome [BR:
tan03041
]
TA13610
03009 Ribosome biogenesis [BR:
tan03009
]
TA13610
03016 Transfer RNA biogenesis [BR:
tan03016
]
TA13610
Enzymes [BR:
tan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
TA13610
Messenger RNA biogenesis [BR:
tan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
TA13610
Spliceosome [BR:
tan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
TA13610
Complex C
U4/U6.U5 tri-SnRNP related factors
TA13610
Ribosome biogenesis [BR:
tan03009
]
Eukaryotic type
Pre-60S particles
Helicases
TA13610
Transfer RNA biogenesis [BR:
tan03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
TA13610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
MTR4_beta-barrel
DEXQc_Suv3
Helicase_C
ResIII
MTR4-like_stalk
nSTAND3
Uteroglobin
Tmemb_cc2
Motif
Other DBs
NCBI-GeneID:
3861818
NCBI-ProteinID:
XP_952201
UniProt:
Q4UEM0
LinkDB
All DBs
Position
2:<941072..>944519
Genome browser
AA seq
1027 aa
AA seq
DB search
MGDPLSMFDVFETEDQREEVEDHTNPLKQGENDKFPNSRNNINNHDEDYEFNHLTSPLTS
DIKIEKIHSSYNCSHYRVAPVDSKYEPKNITTFAKKYPFTLDEFQKRSIESLERDESVLV
CAHTSAGKTVVAEYAIAMGLRDGHRIIYTSPIKALSNQKYRNLSDEFVDVGLMTGDVTLN
PNASVMVMTTEILRSMLYRGSEIVQEMKCVIFDEVHYMRDLERGVVWEETIILIPNKVNL
VFLSATIPNYLEFSEWITRIKRIPCNVISTDYRPVPLNHYLYMSGAEGIYLILDEDNNFK
SSNYNKCLSAGSQNNFRDKESGSRDKRRITSTFKDIENIVKLCFDKNLAPCIIFSFSKSD
CETSATAVRHLDMTSDEEKKLIDEIYKNAMATLSEQDRLLPQNLFMLPLLKNGIGIHHGG
LLPIIKEIIEILFQESLLKVLFSTETFSMGLNMPAKTVVFTKMKKWDGREVRYISSGEYI
QMAGRAGRRGLDTIGVVIIMLDKSDALIDEEVKKIFLGKPLNLDSTFHLGYNMLLNLMRI
EDTTPEYLIERSFMQFQVKNKSAEISSKLKEAKVKLESLRSQFDSELFLLTSSLHENKEK
LEKLNEKMSNIVMNDTKSLNYLNYGRLIYVKNDQVWGWAVCISPPKLKLNNPKNLKKYHF
DCLYQVNMKGDAMYPSTETCWGRFEVKAFPIDSIKKMSQIRITIHEKVDVESQNFQNAMV
NKFEQLSKHIQTLGQLPLLHPVEHMKINNQDLTHILSYLVDTTLHLIKYLYLKNTKSMSS
EIDRLMNEINASPLPMREDYKELFSRYEEYSKVRKETEELENQLKECTQIIMKDELRHMK
SVLRKLEYVDQFGTVTIKGRIACEINATDELLVSELFLRNFFENMEPEHICASLSCLVND
DRKEGKSPTELKLIDAYNKIREIATEIVDVMIDCGIIVDESEYVNRLRPTLMSVVYRWAK
GDPFIEILAESSVFEGSVIRCIRRLDELLRQLACASRNIGNMTMEQTFLTCISKLKKGIA
FTSSLYL
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgggagatccactttccatgttcgatgtcttcgaaactgaagatcaacgtgaagaagtg
gaagatcacactaatccactgaaacagggtgaaaatgataaatttcctaattcacgcaat
aacataaataaccacgacgaagactacgagtttaatcatttgacttctccacttacaagt
gatattaaaattgagaagatccactcttcatacaattgctcccattatagagtggcacct
gtagatagtaagtatgagccaaaaaatattacaacattcgccaagaaatacccattcaca
cttgacgagtttcagaagaggtcaatagagtcattggagagagatgagtcagttctagtt
tgcgcccacacatcagctgggaagacagttgtagccgaatatgctatagcaatgggactg
agggatgggcataggatcatttacacatcaccaataaaggcgttgagtaaccagaagtac
cggaacctgtcagacgagttcgtagacgtgggcctgatgacaggagatgttacattaaac
cctaacgcctcagtgatggtgatgaccaccgaaatcctaaggagcatgctttacagagga
agtgaaattgttcaggagatgaagtgtgtcattttcgacgaggtacactacatgcgtgat
ctagagagaggtgtggtatgggaggagacaatcatcctaataccaaacaaagtaaaccta
gtattcctatccgcaacaatcccgaattaccttgaattctcagagtggattactagaata
aagagaattccctgtaacgttattagtacagattacagaccagtgccactaaaccattat
ttatacatgtctggagctgaaggaatttaccttattcttgatgaggataataattttaaa
tccagtaactataacaagtgcttgagcgctggatcccaaaataattttcgggataaggaa
tcaggttccagagataaacgacgcataaccagcacatttaaggatatagaaaacatagtt
aagctctgttttgacaagaatctcgcaccatgtatcatcttctcgttcagtaaatccgac
tgtgagacgtctgccacagcagtcagacaccttgacatgacctcagatgaggaaaaaaaa
ctcattgacgagatttataaaaatgcaatggcaactctaagtgaacaggacagactttta
ccacaaaaccttttcatgcttccgttacttaagaacgggattggaattcaccacggtgga
ctcctgccgattatcaaggaaatcattgaaatacttttccaagaatcgctactcaaggta
ctttttagcacagaaactttcagcatgggacttaatatgccggctaaaacggtcgttttc
accaagatgaagaagtgggatggaagagaagtcagatacatttcgtccggagaatatata
caaatggctggtagagccggtagaagaggtttagataccattggtgttgttatcataatg
ctagataaatctgatgcactgattgatgaagaggtgaagaagatatttctgggaaagcca
ttgaacttggattcaacatttcatctgggttataatatgcttttgaatttgatgagaata
gaagatacgacaccggaatacctaattgaaaggtcatttatgcaattccaggtcaagaac
aagtcggcagaaatatcctcaaaattaaaggaggctaaagttaaacttgagagtttgagg
agtcaattcgactctgaactgttccttctaacatcatcacttcatgagaataaggaaaaa
ttggaaaaacttaacgagaaaatgagtaacatcgtgatgaatgatacaaaatctttaaat
tacttaaactatggaagattaatttatgttaaaaatgatcaagtttggggttgggccgtt
tgcatttcccctccaaagttaaaattaaacaaccctaaaaatttgaagaagtatcatttt
gattgcttatatcaagttaatatgaaaggtgatgccatgtatccatcaacagagacttgt
tggggaaggtttgaagttaaagcgtttccaattgactcaattaagaagatgtcacagatc
aggatcacaattcacgagaaggtggatgtagagtctcaaaacttccaaaacgccatggtt
aataaattcgaacaactcagtaaacacattcaaactctaggacaactcccacttctacac
ccagttgaacatatgaaaatcaataatcaagatcttacacatatattatcgtatctagtc
gatacaaccttacatttaattaaatatttatatttaaaaaacactaaatcaatgagtagt
gaaattgatagactgatgaatgaaataaatgcttcaccattaccaatgagagaagattat
aaagaattgttttccagatatgaggagtattcgaaagttagaaaggaaactgaggagttg
gagaaccaattaaaggaatgtacacagataattatgaaggacgaattgaggcatatgaag
tcagtattgaggaagttggaatacgtagaccagtttggaacagtgacaatcaagggaaga
atagcatgcgaaattaacgcaacggatgaattgttggtatctgagttgtttttgaggaac
tttttcgaaaacatggaaccggaacatatatgcgcatcattaagttgcttagttaacgat
gatagaaaagaaggaaaatctccaactgaacttaaacttattgacgcttataataaaata
agagaaatagcaactgagatagtggatgtgatgatagactgtggaataatagtagacgag
tctgagtatgtaaataggcttagaccgacattaatgtcagtagtttacagatgggcaaaa
ggagacccttttatagaaatcctggcagaatcatcagtgtttgagggttcagtaataaga
tgcattagaaggttggacgaattgttgaggcaactggcttgtgcctcaaggaatatcgga
aacatgacgatggaacagactttcctgacctgcatatctaaattaaagaagggaatcgca
ttcacctcatcactctacctatga
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