Theileria annulata: TA16350
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Entry
TA16350 CDS
T00253
Name
(RefSeq) replication factor C subunit (RPC2 homologue), putative
KO
K10755
replication factor C subunit 2/4
Organism
tan
Theileria annulata
Pathway
tan03030
DNA replication
tan03410
Base excision repair
tan03420
Nucleotide excision repair
tan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TA16350
03410 Base excision repair
TA16350
03420 Nucleotide excision repair
TA16350
03430 Mismatch repair
TA16350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tan03032
]
TA16350
03036 Chromosome and associated proteins [BR:
tan03036
]
TA16350
03400 DNA repair and recombination proteins [BR:
tan03400
]
TA16350
DNA replication proteins [BR:
tan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
TA16350
DNA Replication Termination Factors
ELG1-RFC complex
TA16350
Chromosome and associated proteins [BR:
tan03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
TA16350
DNA repair and recombination proteins [BR:
tan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
TA16350
Check point factors
HRAD17(Rad24)-RFC complex
TA16350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_30
Rad17
AAA_11
RCF1-5-like_lid
AAA_19
DEAD
AAA_22
AAA_5
RuvB_N
SLFN-g3_helicase
AAA_14
ResIII
AAA_24
AAA_28
PhoH
Mg_chelatase
TIP49
nSTAND3
AAA_2
AAA_33
IstB_IS21
DnaB_C
Hydin_ADK
AAA_16
AAA_assoc_2
KTI12
RNA_helicase
SNF2-rel_dom
AAA_25
Motif
Other DBs
NCBI-GeneID:
3863400
NCBI-ProteinID:
XP_953795
UniProt:
Q4UIH2
LinkDB
All DBs
Position
1:539575..541095
Genome browser
AA seq
336 aa
AA seq
DB search
MGVTKDVPWVEKYRPKKISDVIFQTQAVSIMEQIIETFNMPHMIFHGPPGTGKTSAALAM
ARQIYGLEGMRERVLELNASDERGIDVVRDRIKTYTRINISNNRVNPETNRVMPNYKMII
LDEADMITADAQAALRRVIENYSSISRFILICNYLHKIIGPIYSRCSVFHFKPIETNSQI
DRLKYICNQEGITFDPKFLTTISSGDMRKSITILQVILGSTACLYNEITENAIYSVSGKP
PKRVVESIFEVCRRPEGDVESVCKQIVHDGWDISSIFQQICEYVVESDSIGDIEKSKISL
ELANRDFALLQGGSQYFQLASACFHIKNTITGGTPS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcacaaaggacgtgccctgggttgaaaaataccgtcctaaaaaaatatctgat
gtcatcttccagacccaagcagtttcaataatggagcaaatcatagaaacttttaacatg
cctcatatgatattccacggacctcctggaactgggaaaacctcagcagcacttgctatg
gcaagacaaatttatggtctggaagggatgagagaacgtgttttggaacttaatgcatca
gatgaaagaggaatcgacgttgttagggatagaattaagacatacactagaattaatatt
tcaaataacagagttaatcctgagactaacagagtaatgcctaactataaaatgatcata
ctggacgaggctgacatgatcacagcggacgcccaggctgcacttagacgggtgattgaa
aattattctagcatctcgcgcttcatattaatttgtaactacctccataaaatcatcgga
ccaatttactcaaggtgctcagtgtttcacttcaaaccaatcgaaacaaactcgcaaatc
gatagacttaagtacatctgcaaccaagaagggatcacttttgacccgaagtttttaaca
accatatcatcaggagatatgaggaaaagtattacaattctacaggtaattttgggatca
acggcttgtttatataatgagatcacagagaacgcgatttacagcgtttcagggaagccg
ccgaaaagggtcgtggaaagcattttcgaagtttgcagaagaccagaaggagatgtggag
tccgtgtgtaagcagatagttcatgacggatgggatatttcatcaatattccaacagatt
tgcgaatatgtagttgagagtgactccatcggagacatagagaagtcgaaaatttcactg
gaattggcaaatagagatttcgcactccttcaaggaggatctcagtattttcagcttgct
tccgcatgttttcacatcaaaaacacaataactgggggtacaccatcctaa
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