Theileria annulata: TA20005
Help
Entry
TA20005 CDS
T00253
Name
(RefSeq) rna-processing protein, putative
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
tan
Theileria annulata
Pathway
tan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
TA20005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tan03019
]
TA20005
03041 Spliceosome [BR:
tan03041
]
TA20005
Messenger RNA biogenesis [BR:
tan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
TA20005
Spliceosome [BR:
tan03041
]
Complex B
Other components
Prp19-related factors
TA20005
Complex C
TA20005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_8
B
Mad3_BUB1_I
TPR_IF140_C
TPR_2
Motif
Other DBs
NCBI-GeneID:
3864446
NCBI-ProteinID:
XP_954620
UniProt:
Q4UG46
LinkDB
All DBs
Position
1:complement(2401919..2404670)
Genome browser
AA seq
826 aa
AA seq
DB search
MAKLERSLKIPQGTDPNLGNNHLNNHKDGDSDDFRSNEEEIMDLATLYDKQFHEVIGRDP
YRCKPWIEHVNLLKSLRPPRKTRQLYRISDIWKLNRVDQAPEQGKATVLLGDVSYENINN
KIFKAYEKAVKYIPLSYKVWYNYVKDLVEDISEPFVSDPQPYERVNLVFESCLIHNFAYP
TFYLLYGAFLRFQHRITKVRRLYDKALLNIAITQHHLIWDEYLKFVNEVDLLPLGKAVYR
RYIQLKPSYREVLYEFLKRHGSYDDAAQVLYKLLNDHTFASESGKSSYDLWIELCELIRD
HSDAITSIPVETLIKEGIGKYTDQVATLWIILADIYIVRGQLNIARDTYEEALDRVTTVQ
DFSIIFDVYAKFLENYAKQSNKLGTDQLETLMTVERLESLVNNRALLLASVKLKQNIHNV
YNWINYIQLFKDDPNRMVEIYAEAVQTIDVSKSVGRVTELWARFATFYEERSDLENADKI
YEKASKSDFKYVDDLATLWCCWVEMYLRHKQFKKALEISRRSVSGNGKTSISKRLHTSVK
LWTLSLDMEQNFGTIETTRVTFNKMVELKVVTPQVALSFAGYLEQHKYFEASFNAFEKCV
VLFKWPQLYYLYLPYLTKFVRRYKGTKLERAREIFDQCLYNRELKVPPKFVKYLFYLYAS
MEEEYGMVKKFLSILDDACKLADKEDQLTLIKFYVAKTCEFFGVTQTRQIYQQCLEYVSD
DVARELCSMYIHMERGLGEIDRARAIYVYSSQISDPSINTDFWKGWREFEVLHGNEDSFR
EMLRIKRSVQAQYSKVYYNVEEVGQDDEVEELEENPLTELEKLTQT
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacttgaacggtctttaaagattccacagggaactgaccctaatctgggaaat
aatcacttaaataaccataaagacggagattctgacgattttaggtcaaatgaagaagaa
attatggacttggccactttgtacgataagcagttccacgaagtaattggacgtgatcca
tacaggtgtaaaccatggatagagcacgttaatctgctgaagtcgttaagacccccaagg
aaaactcgacaattatacagaatttcagatatttggaaacttaacagggtggatcaggcc
cctgaacaagggaaagcgacagtcctgttaggtgatgtatcatacgagaatataaataac
aagatatttaaagcttatgaaaaggccgtaaagtacattcctcttagttataaggtgtgg
tataactatgttaaggacctagtagaggatatatctgagccatttgtatctgatccccag
ccgtatgaaagagtaaacttagtgtttgagtcctgtttgatacacaactttgcatatcct
acattttacctgttatatggagcatttttgagattccaacatcgcattacaaaggtcaga
cgcctatacgataaggcactacttaacattgcaataacacagcaccacctcatctgggac
gagtacctcaaatttgtcaatgaagtggacttgttacccctaggcaaagcagtttatagg
agatatatacagctaaaaccgagctatagagaagtgctttacgaatttttgaagaggcat
gggagctacgatgacgcggctcaggtcctatataagctccttaatgaccatactttcgct
tcagaatcaggcaaatcttcatatgatttatggattgagctctgtgagttgatccgagac
cactctgatgccataaccagtatacccgtcgaaaccttgattaaggaggggatcggaaaa
tatacagaccaagttgcgaccctctggattattctggctgatatttacattgttagaggg
caactaaacatcgcaagagacacttacgaggaggctctggatagagtaactacggttcaa
gatttttcaataatcttcgatgtgtatgctaaatttctggaaaattacgcgaaacaatcg
aataaactggggactgaccaattggaaacgttaatgacagttgaaaggttggagagtttg
gtcaataacagagcattgctcctggcttctgtgaagcttaaacagaacatccacaacgta
tacaactggatcaattacatacaactgttcaaggacgaccctaataggatggttgagata
tacgcagaggccgttcagactattgacgtgtcaaagagtgtgggtagagttactgaactt
tgggcacgtttcgctactttttacgaggaacgaagtgatttggaaaacgcagataagata
tatgaaaaggcttcgaaatcagactttaagtacgtggacgaccttgcaactctctggtgt
tgctgggttgagatgtaccttagacataagcaattcaagaaggctcttgaaatcagccgc
aggtctgtcagcgggaatgggaaaacctcaatttcaaagcgattacatacttccgttaag
ctctggacactttcccttgacatggagcagaactttggcaccattgaaacaaccagagtg
acctttaacaagatggttgaattgaaggttgtgacaccgcaagtagctcttagttttgca
ggatatcttgaacagcacaagtactttgaggctagtttcaacgccttcgagaaatgcgtc
gttctcttcaagtggcctcagctttactacttgtatttaccctatctgaccaagttcgtc
cgcaggtataaaggtactaagttggagcgcgctagagaaatcttcgaccagtgcctttac
aacagggagttgaaggttcctcccaaatttgtcaagtacctcttctacctatacgctagc
atggaggaggagtacggcatggtaaaaaagttcctttcgatcctcgacgatgcttgtaaa
ctggctgataaggaggaccagctcacgctgatcaagttttacgtggctaagacctgtgag
ttctttggtgtcactcaaacaagacaaatttaccaacagtgccttgaatacgtcagtgac
gatgttgctagggaactctgctccatgtacattcatatggaaagaggactcggtgaaatt
gatcgtgcgagagcaatctatgtctactcatctcagatttcagatccttcaatcaatact
gacttttggaagggttggagagagtttgaggttttacatgggaacgaagactcgtttagg
gagatgctcagaataaagcgcagtgtccaggctcagtactctaaggtatactacaatgtt
gaggaggttggccaggacgatgaagtcgaggaactagaagaaaatccactaactgaactg
gagaaactaacacaaacataa
DBGET
integrated database retrieval system