KEGG   Typha angustifolia (narrow-leaf cattail): 140758033
Entry
140758033         CDS       T11061                                 
Name
(RefSeq) RNA polymerase sigma factor SigE, chloroplastic/mitochondrial-like
  KO
K03093  RNA polymerase sigma-I factor
Organism
tang  Typha angustifolia (narrow-leaf cattail)
Brite
KEGG Orthology (KO) [BR:tang00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tang03021]
    140758033
Transcription machinery [BR:tang03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     140758033
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r4 Sigma70_r2 GerE Sigma70_r4_2
Other DBs
NCBI-GeneID: 140758033
NCBI-ProteinID: XP_072950109
LinkDB
Position
1:complement(join(1939952..1940146,1940389..1940652,1940805..1941041,1941863..1942009,1942319..1943041))
AA seq 521 aa
MGSATVPSSAPPAAFVGVRRSPPLPRSFFFLSFDSNRPTKCLALVSPSEAVKEPQKSLTR
AVKQPKRVKAVSIDAAPTAASPSSSPSSDSCDLNYNEVAAVLENIYKLSPAEISDAEDIG
GDRRRRRTGRGRKRVEEEEEEESRIGDVCNISVVRSRRRRSKRLSLEKRVALRKRRKEEE
GVAVAISGEKKELGEDVVERLVREHSVSTDLTSLDWKKMKIPPVLSSSEHTRLFKLMQQM
KAILELKENLHKDLNREPTDGELAGAMNISVMQLRQQLEIGRAARNKLIKHNLRLVLFVI
NKYYPDIASGPKFQDLCQAGAKGLITAIDRFETKRGFRLSTYGLFWIRHSITRSMIISSL
TRFPFGIESVRQVIQKAKLELSFELERPPSEEEIIDRVRISPERYFYVLKAGKPVLSLNA
KHSVTQEEFINGITDVDGTGGDKCRQPALLRLALDDVLDSLKPKESVVIRQRYGLDGKGN
RTLGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYF
NT seq 1566 nt   +upstreamnt  +downstreamnt
atgggatcggctaccgtaccgagctcggccccaccggctgcgttcgtcggcgtccgccga
tcgccgcctctcccgcggtcatttttcttcttatccttcgactctaataggcccaccaaa
tgtttggccttggtctcgccgtcggaagccgtgaaagaacctcagaagagcctcacgaga
gctgttaagcagccaaagagagtcaaggccgtctccatcgacgccgctcccaccgcggct
tccccttcctcctctccttcctcggactcttgcgatttgaattacaatgaggttgccgcg
gtgctcgagaacatctacaagctcagccctgcagagatttcggacgcggaggacatcggc
ggggatcgaagaaggaggcggacgggtcgggggaggaagagggtggaagaagaggaggag
gaggagagtcgaattggggatgtgtgtaatattagtgtggtgaggagtaggaggaggaga
tcgaaaaggttgagccttgagaagagggtggctttgaggaagaggagaaaggaggaggaa
ggggtggcagtcgcaataagcggtgaaaagaaggagcttggtgaggatgtggtggagagg
ctcgtaagggagcattcagtgtcgacagacttgactagcttggactggaagaagatgaag
ataccgccagtgcttagttcatcggagcacactcgattgttcaagctgatgcagcagatg
aaggcaatacttgaattgaaggagaacttgcacaaagatctaaatagagaacctacggat
ggagaattggcgggtgcaatgaatattagtgtcatgcaattaagacaacagttagagatc
ggtcgagcagcaaggaacaaattaataaagcacaacctgcgcctagttttatttgtcatc
aacaagtactatccagacattgcaagtggcccgaagttccaagacctctgccaagctggt
gctaaaggtcttattacagccattgaccggtttgaaacaaagcgagggtttcgcctatcc
acatatggcctattttggatccggcattctattactcggtcaatgataatttcaagttta
acacggtttccctttggaattgaatcggtcagacaagtaatccagaaggccaaattagag
ttgtcatttgaacttgagagacctccctctgaggaggagatcattgacagagtaagaata
tcaccagaaagatatttctatgtcctaaaggcaggaaaaccagttttgtcccttaatgca
aagcactcagttacacaagaagaatttatcaacgggatcactgatgtcgacggtactgga
ggtgataaatgtagacagcctgcacttctccgacttgctcttgatgatgtgctagattca
ctaaagcccaaggagagtgtcgtaatcaggcagagatatggactcgacggcaagggcaac
agaacactgggtgagatcgcaggaaatctgaatatctcaagagagatggtccgcaagcac
gaagtgaaggcactcatgaagctcaaacacccagctcgtgttgattatctgcgacgatac
ttctga

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