Typha angustifolia (narrow-leaf cattail): 140758051
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Entry
140758051 CDS
T11061
Name
(RefSeq) autophagy-related protein 13B
KO
K08331
autophagy-related protein 13
Organism
tang Typha angustifolia (narrow-leaf cattail)
Pathway
tang04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
tang00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
140758051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tang04131
]
140758051
03029 Mitochondrial biogenesis [BR:
tang03029
]
140758051
Membrane trafficking [BR:
tang04131
]
Autophagy
Autophagosome formation proteins
ULK complex
140758051
Atg1 complex
140758051
Mitochondrial biogenesis [BR:
tang03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
140758051
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
140758051
NCBI-ProteinID:
XP_072950150
LinkDB
All DBs
Position
1:join(3648390..3649856,3649995..3650149,3656553..3656976)
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AA seq
681 aa
AA seq
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MASSPCNSPFAPPIIEQVITEFFAKSLHIILESRSPYVSSRNYSVDHFTSSPSSSCSPSP
SSSRPRDKWFNLALRDCPAALENCDLWRQSNLEPLVIDIVLMRKMLTSSTPGSSHGGYLI
RNLSGKDCYLNRSSGPAGPFPESEGEKIVERWIVQYESQNSSSFGREAYQGSRKSSYGSS
HSSEIPNLYKKTYSRLIVLLRSLYVVVRLLPAYKLFCELNSSGRIHPLRLSHRINSFIKP
FTRAENAEFNCFGFVPIDTPFGRLSLSVSYLPTLEDVNSEPSTPLSTQFIMDYVGSPTTD
PLKRFQSLPSAELAPACISVARRHSWSIDHGAIPSVSLSPSPGYSDSRVFHCNRTSYLPP
RSPMHDHSLSPSSLPTTASTVHKKNTSFDEYWSLSPSTSPSPPAHFSGGNVLNSLFRSES
APIGITSSRPDRNSALPPHPSPKCAKQSCSLKADNLRTQVPTASPDCKLQSKNEFLSLGE
SQSSKALQKVFYFGKDDIGNLPDWRASCSSPRIPSWNSSRLYDDFDDSESSYPFVEDGRD
RIEISRGKCQEGSNAESEGSFAVKSSPDAIVGAVVQMLKTAPPLRQELSYSVRSSQGLKG
EALGQSIKNGEDMEVRTKELISHASSSAIAASGLSKSRTTADALKDLLRYKEMKDALLQR
GGSQSLNINSKERSSGEEGDS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcatcttctccatgcaattctccctttgcgcctcccattattgagcaagtgatcact
gaattttttgcaaagagcctacacattatactcgagtcgaggtccccttatgtctcctct
cgcaattatagtgtggatcacttcacctcttctccttcttcctcctgctccccgtcccca
tcaagtagtaggccaagggacaagtggttcaatttggccctgcgggattgccctgcagca
cttgagaattgtgatctgtggcgacagagcaatcttgagccattggtcattgatattgtt
ttgatgcgtaagatgttgacctcaagcacaccagggtcatcccatggtgggtatcttatt
aggaacttgtcagggaaggattgctaccttaatcggagttctgggccagctgggcctttt
ccagaaagtgaaggtgagaagattgtagagagatggattgtgcaatatgaaagtcaaaat
agcagcagctttgggagagaggcataccagggtagtaggaaaagtagttatggttcttct
cactcatcagaaatcccaaatttgtataagaaaacatatagtagattaatagtacttctt
cggtctctttatgtggttgttagacttttgccagcatacaaacttttctgtgagctcaat
tcctcaggtcgaatccacccacttaggctctcccacaggattaattcttttatcaagccc
ttcactcgggcagagaatgctgagtttaattgttttggttttgttccaattgacactcct
tttggtaggctgagtctatcagtgtcatatcttccaacattagaagatgtaaattcagag
ccttctacacctttatctacacagtttattatggattatgttggtagtccaacaactgac
cctcttaagagattccaatcactgccttcggccgaactagcacctgcatgcatttcagtt
gccagacgacatagttggagtattgatcatggagctataccttcggtttcattgtctcca
tcacctggttactcagattctcgtgtatttcattgtaatcggacttcatatcttcctcct
cgtagtcctatgcatgatcattctctgtcaccatcctcactcccaaccactgcatctact
gtgcacaagaagaatacaagttttgatgaatactggtcattgtcaccatcaacttcccct
tctccaccagcccatttttctggtggaaatgtactgaattctcttttccgctctgagagt
gctcccattggtattacctcatctaggcctgacagaaacagcgccttgcctccacatcct
tctccaaaatgtgcgaagcagtcttgttctttgaaggcagataatctcagaactcaagtt
ccaactgcctcacctgactgtaagctacagagtaaaaatgaatttctcagcttgggtgag
tcccagtccagcaaggccctgcagaaggtattttattttggcaaagatgacattggaaac
ttacctgactggagagcatcctgcagttcaccaagaatcccatcttggaattctagcagg
ctttatgatgattttgatgattctgagtcttcttatccctttgttgaagatggcagagac
aggattgaaatatctcgaggaaaatgtcaagaaggcagcaatgcagaatctgaaggttca
tttgcagtgaaaagttccccagacgccattgttggtgctgttgtacaaatgctcaagact
gccccacctctgcggcaagaattatcctactcagtcaggtcatcacaaggcctcaaaggt
gaagctttaggtcagagtatcaagaatggtgaagacatggaagtcagaacgaaggaactc
attagccatgcatcaagttcggcgattgcagcttcaggactttctaagtctaggactact
gcagatgcacttaaagatctgctccgttacaaagaaatgaaagacgcgctactccagaga
ggtggttcacagtcattaaatattaactctaaagagaggtcctcaggtgaggaaggggac
tcttag
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